Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07568 ATGCGTATGAATATTGAAGATATTCGGAAGCTTTTTCAGATCAAGATGGATAAATTGGGAACATTATTGGTTTTCAGTTTCATAACGTTCTCTCTATTACTCATTTTCAGTGTTAAACACCAAATATCAATCTTCAATTTTGTTGCCGGATTTTCCAATCAGAATGTTACTTCTTCTTCAACTGTCTTGAAACAAGGAACTTCAAATATTACGGTGTTGGGAGATAAAGATGATCACAATGTTGTGACAGGCCAGACACAAACAATCTTAGATATTGCTCCAAAAAATCATTCTCTTGAAGACCAAAAGAAGAATACCATTGCTACTGACCAATTACTTGACGGACTTCTAGTTTCTGCATTCGAAGAAGCATCGTGCTTAAGTAGGTATCAATCTCATTTATTCCGCAAACCTTCCCCTTATAAACCTTCCGCATATCTCATATCCAAGCTACGAAGCTATGAAAATCTTCATACAACTTGTGGACCTCGTACAGAATCATACAATAAAGTCATGAGAAAGGGCCCAAAACTTGGCAAAAATGATGCAGGCACAAATTGCAAATATCTTGTCTGGACAGCTTCCAATGGCTTGGGGAACAGGATGATAACCTTGGCTGCGGCGTTTCTCTATGCTATCCTCACGGACCGGGTTTTACTTGTCGAATTTGGGACTGACATGTCTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGTTATTACCAAGGAGTTTTCCTTATTGGAATGATCAGACACATATTGAAACTTATGAAAACATGCTAATGAATAGCAAGAAAAACAGATCAAATGGGCTTTTGCCGCAATTTCTCTTTCTTAATCTACAGCACACCCGTGATGGTCATAACAATTTCTTTCATTGTGATCGAAGTCAAGGTCTTCTCCAAAATGTTTCCGTTCTAATTTTGTCGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTACGCAAGAACTAAACAAAATGTTCCCTAGGAAAGACACCGTTTTTCACCATTTGGGGCGTTACCTTTTCCACCCGTCCAATGAGGCGTGGGAACTAATTAGCAGGTTCTGTGAGGAACACTTATCCAAGGAAAATGAGAAAATTGGTTTGCAGATTAGAGTATTCAAGACTCACCGAGCACCACATGAAACCATTATCAAAGAAATTCTAGCCTGCACCCTTCAGCATAAGCTGCTTCCCGAATTTGGCGTGCAGAAGACAGTAGCGGCATCTGTTTTAAAGAAGCAGACATCAAAAGCTGTTCTAGTGGCATCTCTATATTCCGAATATGGCGAGAAGCTGAGGACTGTGTATAAGGCAAATACAACTGTGACCGGGGAGGTAATAAATGTTTATCAGCCAAGTCATGAAGGGCGTCAAAAATCAAATAATGGCACGCACAATATTAAAGCATGGGCAGAAATATATCTGCTGAGTCTGTGTGATGCACTGATCACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTAAAGCCATGGATTCGTCAGAGGGCAAAACGGGAAACCATCCCAAATCCACCTTGTCGACGAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCAAAGTATGATTGTAGGGCCAACAGCACAATTGATTATACTTCCCTTTTTCATCACATGAAGCATTGTGAAGATGTATCTACAGGATTGAGGTTGGTTAATGCTGATCATTAG 1731 0.4009 MRMNIEDIRKLFQIKMDKLGTLLVFSFITFSLLLIFSVKHQISIFNFVAGFSNQNVTSSSTVLKQGTSNITVLGDKDDHNVVTGQTQTILDIAPKNHSLEDQKKNTIATDQLLDGLLVSAFEEASCLSRYQSHLFRKPSPYKPSAYLISKLRSYENLHTTCGPRTESYNKVMRKGPKLGKNDAGTNCKYLVWTASNGLGNRMITLAAAFLYAILTDRVLLVEFGTDMSGLFCEPFPDSSWLLPRSFPYWNDQTHIETYENMLMNSKKNRSNGLLPQFLFLNLQHTRDGHNNFFHCDRSQGLLQNVSVLILSSDQYFVPSLFMIPSFTQELNKMFPRKDTVFHHLGRYLFHPSNEAWELISRFCEEHLSKENEKIGLQIRVFKTHRAPHETIIKEILACTLQHKLLPEFGVQKTVAASVLKKQTSKAVLVASLYSEYGEKLRTVYKANTTVTGEVINVYQPSHEGRQKSNNGTHNIKAWAEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWIRQRAKRETIPNPPCRRAKSMEPCFHYPPKYDCRANSTIDYTSLFHHMKHCEDVSTGLRLVNADH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07568 576 Gene3D - 357 515 - -
Vivi2g07568 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 27 573 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi2g07568 576 Pfam Xyloglucan fucosyltransferase 99 545 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi2g07568 576 Gene3D - 184 235 - -
Vivi2g07568 576 FunFam Galactoside 2-alpha-L-fucosyltransferase 185 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07568 Vivi-Chr2 220926742 220928743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07568 107 572 Xyloglucan Fucosyltransferase1 AT2G03220 51.797 1.65e-167 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07568 K13681 - gmx:100799776 807.749