Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07106 ATGGATCCTTCTTCTCAGCAAATGTCAAGGCAATCATCAATGGAAAACATGCTGGTTTGTTCAAAAGAACAGCAAGAAAACAAACCAAAACCTCAGCCAGAACAAGCTTTGAAATGTCCGAGATGTGATTCCACCAACACTAAATTCTGTTACTACAACAATTACAGTCTTACTCAGCCGAGATATTTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGTGGGACATTGAGGAATGTTCCTGTTGGTGGTGGATGTAGGAAGAACAAAAGATCATCGTCGTCGAAGAGGGTTCAAGATCAAGCATTTGTGCCGAATCATAATCCGTTTTCTAACATACCTCATTTTGATCAATCTAATGAGTTTGCATTAGCATTGGCTAGGCTTCAGAAACAATCATGTGGTGGACAAATGGGGTATGATGAGAATGAGTTTTCAATGGTGGGAAACAATGGATCAAGCATGAACAATTCAATGAACATAAATCATGGGTTTATGGATGCAATTAGAAGTGGGTTGTTTCTTGGAAATGGAATGCATTATAATAATAACAATGTTCAGAATATGTATAATGGTGGGTATGGAAATGGTGACAATGGAGAAGTGAATAGTGGGAACAACAATTGTGGGGTTAGTGAAGAGATGATGTTTAATTATGATCAAGAAATGGGCAATTGCAATGCTGCCTTTAACATGAAGCAAGAGCAAAGTGAAAGTAAGGTTTTTGGTGGTTTTCCATGGCAGATGAATGGAGGAATTGCAAACATGGGTGAAGTTGAACAAGCAAGAGCCAGTTGGAATAATGGTTTCAACACACCTTCTTGGCAAGGACTTCTTCAAAGTCCCCTAATGTAG 855 0.3895 MDPSSQQMSRQSSMENMLVCSKEQQENKPKPQPEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRVQDQAFVPNHNPFSNIPHFDQSNEFALALARLQKQSCGGQMGYDENEFSMVGNNGSSMNNSMNINHGFMDAIRSGLFLGNGMHYNNNNVQNMYNGGYGNGDNGEVNSGNNNCGVSEEMMFNYDQEMGNCNAAFNMKQEQSESKVFGGFPWQMNGGIANMGEVEQARASWNNGFNTPSWQGLLQSPLM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07106 284 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Vivi2g07106 284 MobiDBLite consensus disorder prediction 1 37 - -
Vivi2g07106 284 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g07106 284 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Vivi2g07106 284 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Vivi2g07106 284 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 220 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07106 Vivi-Chr2 213502820 213504420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07106 35 284 C2C2-Dof Transcription Factor Family AT2G28510 42.803 4.24e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g07106 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07106 - - gmx:100799737 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07106 2 213502820 213504420 Vivi2g07106 2 213502820 213504420 ECH