Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02057 ATGTCTCAGATGATTAATGATTCAACAACCATAAAACTTTTTGGTACAACCATCTTTCTGCCACACAACATCTATGTCTCTTCCAATGATTCTTCCTCAAAATTTGCTCATGAAGTTTTCTCTGATCATAGTCTCCTTTCATCTTCTACACTTGATGAAGTCTCACAACAAACCATAGAGGATTTAAACACTCCCTCAGCTGAAACAGAAGCTTCACAACAGAATTCCACAAAACTTGATGAACAAAGTGATGTGTCACAAGACAAAACTCCAAAGAAACCAGACATAATTGTTCCATGTCCAAGATGCAAAAGCATGGACACAAAGTTTTGCTACTACAACAACTACAACGTCAAACAACCCCGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCCGGTGGAACCGCGAGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAAGCCACTTGTAATTATCCTCAAATGAGTACTGTCTTGACCTTTGGATCAAATTCTTCTAATATAACATACTATGGTGGTTTTTTGCAACCATTATGGAATGTACAATCTATCCCAACACAATCTGGTGGCCCAAGCAAATCTACATTAGGGAAACATTCAAGAGATGAAGACATGATCAATCATTCCAACTCAGATAAAGCAAAGCCTGGATTCCAAAGCAACAACAAAAGAAGTAATGATAGTAATGAAGTGTTGATTCCTAAGTTACTGAGATTTGATGACCCTAATGATGTTGCAAGGAGTTCTATATGGTCAACAGTAGGAATCAAGAATGGGAGAGGAATTTTTAAGGGATTTGGATCTAACTTTGATGACAAGAAGAACCATATAGTTGAAGCATCTTCATCAGTATTGAAAGCTAACCCAGCAGCTTTATCAAGGTCTATTGTGTTACATGAGAGAATTTAA 921 0.3789 MSQMINDSTTIKLFGTTIFLPHNIYVSSNDSSSKFAHEVFSDHSLLSSSTLDEVSQQTIEDLNTPSAETEASQQNSTKLDEQSDVSQDKTPKKPDIIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKATCNYPQMSTVLTFGSNSSNITYYGGFLQPLWNVQSIPTQSGGPSKSTLGKHSRDEDMINHSNSDKAKPGFQSNNKRSNDSNEVLIPKLLRFDDPNDVARSSIWSTVGIKNGRGIFKGFGSNFDDKKNHIVEASSSVLKANPAALSRSIVLHERI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02057 306 MobiDBLite consensus disorder prediction 200 214 - -
Vivi2g02057 306 MobiDBLite consensus disorder prediction 216 230 - -
Vivi2g02057 306 MobiDBLite consensus disorder prediction 189 230 - -
Vivi2g02057 306 Pfam Dof domain, zinc finger 97 152 IPR003851 GO:0003677|GO:0006355
Vivi2g02057 306 MobiDBLite consensus disorder prediction 56 93 - -
Vivi2g02057 306 ProSitePatterns Zinc finger Dof-type signature. 100 136 IPR003851 GO:0003677|GO:0006355
Vivi2g02057 306 PANTHER CYCLIC DOF FACTOR 2 173 305 IPR045174 GO:0003700|GO:0006355
Vivi2g02057 306 ProSiteProfiles Zinc finger Dof-type profile. 98 152 IPR003851 GO:0003677|GO:0006355
Vivi2g02057 306 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02057 Vivi-Chr2 96517029 96518093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02057 68 306 C2C2-Dof Transcription Factor Family AT5G62430 42.955 7.26e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02057 zf-Dof 4.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02057 - K16222 vvo:131646459 490.73