Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02056 ATGTCTGAGATGATTAATCTTTCAACCATAAAGCTTTTTGGGACAACCATTTTTCTAACACACAATACTCATGTCCTCACCAATGATTCTTCTCAACAGAGTTCTACAAAACCAGATGATCAAATTGATATGTCACAAGACAAATCTCCAAAGAAACCAGACATGGCAGTTCCATGTCCAAGATGCAACAGCAAGGACACAAAATTCCGCTACTACAACAACTTCAAAGCCAAACAGCCCAGACACTTTTGCAAAAACTGCCAGAGATACTGGACTTCTGGAGGAACCGCTCGAAAAATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAACTCACTAACTTTCCATTAGATGTCTTGCATTATTCTCAAATGAGTAATGTCTTGCCCTTTGGATCGAATTCTTCTGATATCACTTCAACTTCACCTGCATACTATGGTGGTTTCTTGCAACCATTTGTGGCAACACAATCTTGTGGCCCAAGTAAACCTACACTAGGGAAACATTCAAGAGATGGTGACATGATCATTTATTCCAACTCAGAGAAAGAAAACGTTGGCTTAAAAAGAAACAAGAAAGAAAGTCATGATACTAAATCTAATGAAGAATTGGTTCCTATGTTACTAAGAGTTGACGACCCTAATGATGTTGTAATGAGTTCTATATGGTCAACAATAGGAATCGAGAATGGGAGAGGAATTTTCAAGGGATTTGGATCTAACTTTGATGACAAGAAGAACCATATAGTTGAAGCATCTTCATCAGTATTGAAAGTTAACCCTATAGCTTTACCGAGGTCTATTGTGTTACATGTGATGATTTGA 822 0.382 MSEMINLSTIKLFGTTIFLTHNTHVLTNDSSQQSSTKPDDQIDMSQDKSPKKPDMAVPCPRCNSKDTKFRYYNNFKAKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKLTNFPLDVLHYSQMSNVLPFGSNSSDITSTSPAYYGGFLQPFVATQSCGPSKPTLGKHSRDGDMIIYSNSEKENVGLKRNKKESHDTKSNEELVPMLLRVDDPNDVVMSSIWSTIGIENGRGIFKGFGSNFDDKKNHIVEASSSVLKVNPIALPRSIVLHVMI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02056 273 PANTHER CYCLIC DOF FACTOR 2 153 268 IPR045174 GO:0003700|GO:0006355
Vivi2g02056 273 MobiDBLite consensus disorder prediction 28 59 - -
Vivi2g02056 273 Pfam Dof domain, zinc finger 56 110 IPR003851 GO:0003677|GO:0006355
Vivi2g02056 273 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Vivi2g02056 273 SUPERFAMILY Zinc beta-ribbon 38 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02056 Vivi-Chr2 96467176 96468211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02056 9 270 C2C2-Dof Transcription Factor Family AT5G62430 36.570 6.60e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02056 zf-Dof 4.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02056 - K16222 vvo:131646463 456.447