Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02053 ATGTCTGAGATGATCAATGTTTCAACCATAAAGCTTTTTGGGACAACCATATTTCTAACAAGTAACACTGATGTCCTTACCAATGATACTCCTCAACAAAATTCCACAAAACATGATGAACAAAGTGATTTGTCACATGACAAATCTCCAAACAAACCAGACATAACTGTTCCATGTCCAAGATGCAACAGCAAGGACACGAAATTCCGTTACTACAACAACTTCAAAGCCAAACAGCCCCGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCCGGAGGAACCGCAAGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAATTCACTAATTTTCCTTTAGATGTCTCGCATTATTCTCAAATGAGTAATGTCTTGCCCTTTGGATCAATTTCTTCTGATATCTCTTCAACTTCATGGAACCAGGCAATGTGTTATGCCATTTCAGTAGGGAAACATTCTGTGCCATCACAATCTTGTGGCCCAAGTAAACCTACATTAGGGAGACATTCAAGAGATGGATTCATAAGATTCCAAAATGTTACTTCATGTGATGCAGAATTAGATTTCTTTGTTGGGTAA 588 0.3929 MSEMINVSTIKLFGTTIFLTSNTDVLTNDTPQQNSTKHDEQSDLSHDKSPNKPDITVPCPRCNSKDTKFRYYNNFKAKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKFTNFPLDVSHYSQMSNVLPFGSISSDISSTSWNQAMCYAISVGKHSVPSQSCGPSKPTLGRHSRDGFIRFQNVTSCDAELDFFVG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02053 195 MobiDBLite consensus disorder prediction 28 59 - -
Vivi2g02053 195 Pfam Dof domain, zinc finger 56 110 IPR003851 GO:0003677|GO:0006355
Vivi2g02053 195 SUPERFAMILY Zinc beta-ribbon 42 94 - -
Vivi2g02053 195 PANTHER CYCLIC DOF FACTOR 2 28 125 IPR045174 GO:0003700|GO:0006355
Vivi2g02053 195 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02053 Vivi-Chr2 96344761 96345348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02053 9 125 C2C2-Dof Transcription Factor Family AT5G62430 49.573 1.88e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02053 zf-Dof 6.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02053 - - vvo:131649630 397.127