Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02026 ATGTCTGAGATGATTAATGTTTCAACCATAAAGCTTTTTGGGACAACCATTTTTCTAACACACAATACTCATGTCCTTACCAATGATTCTTCTCAACAGAATTCTACAAAACCAGATGATCAAGTTGATATGTCTGAGGACAAATCTCCAAACAAACCAGACATGACTGTTCCATGTCCAAGATGCAACAGCAAGGACACAAAATTCCGCTACTACAACAACTTCAAAGCCAAACAGCCCAGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCTGGAGGAACCGCTCGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAATTCACTAACTTTCCATTAAATGTCTTGCATTATTCTCAAATGAGTAATGTCTTGCCCTTTGGATCGAATTCTTCTGATATCAATTCAACTTCACCCGCATACTATGGTGGTTTCTTGCAACCATTTGTGCTAACACAATCTTGTGGCCCAAGTAAACCTACACTAGGGAAACATTCAAGAGATGGTGACATGATCATTTATTCCAACTCAGAGAAAGAAAACCTTGGCTTAAAAAGAAACAACATAGAAAGACATGATAGTAATGATGAATTGGTTCCTAAGTTACTAAGAGTTGACGACCCTAATGATGTTGTAATGAGTTCAAGGGATTTGGATCTAACTTTCATGACAAGAATCATGTGGTTGAAGAATCTTCATCAGTATTGA 717 0.3835 MSEMINVSTIKLFGTTIFLTHNTHVLTNDSSQQNSTKPDDQVDMSEDKSPNKPDMTVPCPRCNSKDTKFRYYNNFKAKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKFTNFPLNVLHYSQMSNVLPFGSNSSDINSTSPAYYGGFLQPFVLTQSCGPSKPTLGKHSRDGDMIIYSNSEKENLGLKRNNIERHDSNDELVPKLLRVDDPNDVVMSSRDLDLTFMTRIMWLKNLHQY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02026 238 MobiDBLite consensus disorder prediction 28 59 - -
Vivi2g02026 238 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Vivi2g02026 238 SUPERFAMILY Zinc beta-ribbon 37 94 - -
Vivi2g02026 238 PANTHER CYCLIC DOF FACTOR 2 29 129 IPR045174 GO:0003700|GO:0006355
Vivi2g02026 238 Pfam Dof domain, zinc finger 56 110 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02026 Vivi-Chr2 95022507 95023585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02026 9 231 C2C2-Dof Transcription Factor Family AT5G62430 33.086 1.88e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02026 zf-Dof 8.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02026 - K16222 vvo:131646464 498.434