Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02023 ATGTCTGAGATGATTAATCTTTCAACCATAAAGCTTTTTGGGACAACCATTTTTCTAACACACAAGGCTCATGTCCTTACCAATGATTCTTCTCAACAGAATTCTACAAAACTAGATGATCAAATTGACATGTCAGAGGACAAATCTCCAAAGAAACCAGACATGACTGTTCCATGTCCAAGATGTAACAGCAAGGACACAAAATTCCGGTACTACAACAACTTCAAAGCCAAACAGCCCAGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCTGGAGGAACCGTCAGAAAGATGCTTGTAGAGGCAGGTCGCCGTAAGAACAAATTCACTAACTTTCCATTAGATGTCTTGCATTATTCTCAAATGAGTAATGTCTTGCCCTTTGGATCAAATTCTTCTGATATCTCTTCAACTTCATGGAACCATGCAGTGTGTTATGCCATGTCCTTAGGGAAACATTCTGTGCCAACACAATCTTGTGGCCCAAGTAAACCTGCACTAAGGAAACATTCAAGAGATGGTGACAAGATCATATATTCCAACTCAGAGAAAGCAAACCTTGGCTTAAAAAGAAACAACAAAGAAAGGCATGATACTAATGATGAATTGGTTCCTAAGTTACTAAGAGTTGACGACCCTAATGATGTTGTAATGAGTTCTATATGGTCAACAATAGGAATCGAGAATGGGAGAGGAATTTTCAAGGGATTTGGATCTGACTTTCATGACAAGAATCATGTGGTTGAAGAATCTTCATCAGTATTCAAAGTTAACCCTGCAGCTTTACCAATGTCTATTGTGTTCCATGTCATTATTTGA 825 0.3867 MSEMINLSTIKLFGTTIFLTHKAHVLTNDSSQQNSTKLDDQIDMSEDKSPKKPDMTVPCPRCNSKDTKFRYYNNFKAKQPRHFCKNCQRYWTSGGTVRKMLVEAGRRKNKFTNFPLDVLHYSQMSNVLPFGSNSSDISSTSWNHAVCYAMSLGKHSVPTQSCGPSKPALRKHSRDGDKIIYSNSEKANLGLKRNNKERHDTNDELVPKLLRVDDPNDVVMSSIWSTIGIENGRGIFKGFGSDFHDKNHVVEESSSVFKVNPAALPMSIVFHVII 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02023 274 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Vivi2g02023 274 Pfam Dof domain, zinc finger 56 110 IPR003851 GO:0003677|GO:0006355
Vivi2g02023 274 MobiDBLite consensus disorder prediction 40 54 - -
Vivi2g02023 274 PANTHER CYCLIC DOF FACTOR 2 138 271 IPR045174 GO:0003700|GO:0006355
Vivi2g02023 274 MobiDBLite consensus disorder prediction 30 58 - -
Vivi2g02023 274 SUPERFAMILY Zinc beta-ribbon 41 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02023 Vivi-Chr2 94957363 94958480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02023 10 271 C2C2-Dof Transcription Factor Family AT5G62430 37.582 2.95e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02023 zf-Dof 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02023 - K16222 vvo:131646463 518.85