Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02021 ATGTCTCAGATGTTTAATGATTCAACAACCATAAAACTTTTTGGTACAACCATCTTTCTGACACACAAAATATATGTCTCTTCCAATGATTCTTCCTCAAAATTTGCTCATGAAGGTTTCTCTGATCATAGTATTCATTCATCTGTATCTTCATCTTCTACACTTGATGAGGTCTCACAACAAACCATGGAGGACTTAAACACACCCTCAGCTGAAACAGAAGCTTCTCAACAGAATTCCACAAAACTTGATGAACAAAGTGATGTGTCACAAGACAAAACTCTAAAGAAACCAGACATAATTGTTCCATGTCCAAGATGCAAAAGCATGGACACAAAGTTTTGCTACTACAACAACTACAACGTCAAACAACCCCGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCCGGTGGAACCGCGAGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAAGTCACTTGTAATTATCCTCAAATGAGTACTGTCTTGACCTTTGGATCAAATTCTTCTATTATAACATACTATGATGGTTTTTTGCAACCATTATGGAATGTACAATCTGTGCCAACACAATCTTGTGGCCCAAGTAAACCTGTATTAGGGAAACATTCAAGAGATGGAGACATGATCAATCATTCTAACTCGAAGAAAGAAAAGCGTGGATTAGAAAGCAACAACAAAGAAAGGAATGATAGTGTGTTGATTCCTAAGTTATTGAGATTTGGTGACCCTAATGATGTTGCAAAGAATTCTATATGGTCAACAGTAGGAGTCAAGAATGGAAGAGGAGTTTTCGAGGGATTTGGATCTAACAGTGATGACAATAATCATGCGGTTGATGCATCTTCATCAGTATTGATGAAAGCTAATCCTGCAGCTCTATCAAGATCTATTGTGTACCACGAGAGAATTTGA 927 0.3808 MSQMFNDSTTIKLFGTTIFLTHKIYVSSNDSSSKFAHEGFSDHSIHSSVSSSSTLDEVSQQTMEDLNTPSAETEASQQNSTKLDEQSDVSQDKTLKKPDIIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKVTCNYPQMSTVLTFGSNSSIITYYDGFLQPLWNVQSVPTQSCGPSKPVLGKHSRDGDMINHSNSKKEKRGLESNNKERNDSVLIPKLLRFGDPNDVAKNSIWSTVGVKNGRGVFEGFGSNSDDNNHAVDASSSVLMKANPAALSRSIVYHERI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02021 308 MobiDBLite consensus disorder prediction 45 92 - -
Vivi2g02021 308 MobiDBLite consensus disorder prediction 198 233 - -
Vivi2g02021 308 ProSitePatterns Zinc finger Dof-type signature. 104 140 IPR003851 GO:0003677|GO:0006355
Vivi2g02021 308 ProSiteProfiles Zinc finger Dof-type profile. 102 156 IPR003851 GO:0003677|GO:0006355
Vivi2g02021 308 MobiDBLite consensus disorder prediction 205 231 - -
Vivi2g02021 308 MobiDBLite consensus disorder prediction 45 85 - -
Vivi2g02021 308 Pfam Dof domain, zinc finger 101 155 IPR003851 GO:0003677|GO:0006355
Vivi2g02021 308 PANTHER CYCLIC DOF FACTOR 2 180 307 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02021 Vivi-Chr2 94773612 94774571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02021 72 308 C2C2-Dof Transcription Factor Family AT5G62430 41.522 9.37e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi2g02021 zf-Dof 6.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02021 - K16222 vvo:131646459 498.049