Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi219g00009 ATGGATCCTTCTTCTCAGCAAATGTCAAGGCAATCATCAATGGAAAACATGCTGGTTTGTTCGAAAGAACAGCAAGAAAACAAACCAAAACCTCAGCCAGAACAAGCTTTGAAATGTCCGAGATGTGATTCCACCAACACTAAATTCTGTTACTACAACAATTACAGTCTTACTCAGCCGAGATATTTCTGTAAGTCTTGCCGGAGATATTGGACCAAAGGTGGGACATTGAGGAATGTTCCTGTTGGTGGTGGATGTAGGAAGAATAAGAGATCATCGTCGTCGAAGAGGGTTCAAGATCAAGCATTTGTGCCGAATCATAATCCGTTTTCAAGCGTACCTCATTTTGATCAATCTAATGAGTTTGCATTAGCATTGGCTAGGCTTCAGAAACAATCATGTGGTGGGCAAATGGGGTATGATGAGAATGAGTTTTCAATGGTGGGAAACAATGGGTCAAGCATGAACAATTCAATGAACATAAATCATGGGTTTATGGATGCAATTAGAAGTGGGTTGTTTCTTGGAAATGGAATGCATTATAATAATAACAATGTTCAAAATATGTATAATGGTGGGGGGTTTGGAAATGGTGACAATGGAGAAGTGAATAGCGGAAACAACAATTGTGGGGTTAGTGAAGAGATGATGTTTAATTATGATCAAGAAATGGGCAATTGCAATGCTGCCTTTAACATGAAGCAAGAGCAAACTGAAAGTAAGGTTTTTGGTGGCTTTCCATGGCAGATGAATGGAGGAATTGCAAACATGGGTGAAGTTGAACAAGCAAGAGCTAGTTGGAATAATGGTTTCAACACACCTTCTTGGCAAGGGCTTCTTCAAAGTCCTCTCATGTAG 858 0.3986 MDPSSQQMSRQSSMENMLVCSKEQQENKPKPQPEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRVQDQAFVPNHNPFSSVPHFDQSNEFALALARLQKQSCGGQMGYDENEFSMVGNNGSSMNNSMNINHGFMDAIRSGLFLGNGMHYNNNNVQNMYNGGGFGNGDNGEVNSGNNNCGVSEEMMFNYDQEMGNCNAAFNMKQEQTESKVFGGFPWQMNGGIANMGEVEQARASWNNGFNTPSWQGLLQSPLM 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi219g00009 285 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Vivi219g00009 285 MobiDBLite consensus disorder prediction 1 37 - -
Vivi219g00009 285 MobiDBLite consensus disorder prediction 1 26 - -
Vivi219g00009 285 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Vivi219g00009 285 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 215 IPR045174 GO:0003700|GO:0006355
Vivi219g00009 285 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi219g00009 35 285 C2C2-Dof Transcription Factor Family AT2G28510 42.642 5.76e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi219g00009 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi219g00009 - - gmx:100799737 300.827