Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06037 ATGGAAATGACAATGCATGTTAGTTTAAGGAACAAGCTTAAGACTCTTTGTGATTATGGTGATGGTTGGTCTTATGCCATTTTGTGGCGGTTTCATCAAAAGAATCCTATGTTGTTGAATGTGGAAGAAGCATACTATGAGGAAGAATTGAGAGAAGAGATTCAAAAAATGGTTCCACTAGTGCATTTGCTTGGTGAAGGAATTGTTGGTGAAGCTGCTTTCAAAGGAAAGTACAGTTGGTTGCATTCAGTTAGTTGTGAGGATGATTTTTCTATGTATCAACAATTCAACTCTGGATTAATTAAGACAATTGTGGCCATACCGGTCAAGGCATTTGGAGTGGTACAGTTTGGATCCAGAAAGAAGGTTTTGGAGACAATGGATTTTTTGGATCAAGCACAAAGTTTGCTCAAGGAGATAGATGAAGTCGACATGATAAAGGACTCAGAAAATGCAGTTTTATCGATGGATTTTACGAATAATGATCTCGATGGATTGCTAGCTTCGTTTTCCTCTGAAAATTCATGTGATTGGAATCTCAATTCTGCTAATGAAGAAAATTATAGAGATCTGAGAGAAGTTTTTTCTCCTTGTGGAGAAAGGATCACATCTCTAGAATTTGAGGAAAATTCTTGTTTTGACTCATTGTTGCAACAGTTTTTATCTGAAACAATGGCACAAGAAGTTCATGATTCATCATTGGCCTCATTGCAGAATATAGACGATGTTTTGTTTCAAGAAAAGATACAAAATTCAATGGATAATGTTGTGACAGAAGTTGATTTACCATCGAGTTCAAGTATAATAAATGGAATCTCGAATAGTTTAGAGCTGGTCGATATGTTGGAAGAGTTTTTGAAGTTCGGCTCCGTGGATGATCTTTGCGAATGGTTCGCTCCTTCTCCAGACGAGACTACTATCTGCAAAACTATGGCTCAATTGGAAAAAACTCTTTCCGAACCAATAGAGTTTAATCCTATTTGCTCTGATCTCGGCCTGGCAGAGAAAGAAACATCTGTTGTAATGCATAGTTCCGAGAATGATTTCTTGGACAACACGGAATTGGATTTGGGAATTGATCAAGGTGGCGAGTTGTGGGGGAACTTACTTACACCAATGGTGAATGCTGGTACTGATAATACCGCGTTTTCTGAATGCGTATCAGAGTTAAATACCGGTACACCGACCGATAATACACGGAAGAGGCTATTCGCAGAGTTAGGAATTGAAGAGCTTTTGAGAGGTGAAGCGAATTACAGCAATCCCTTTAGCAGATCTACTTTCGAAAATGAGTTATCGTCTAATAAAAAACAGATGGTAGAGTTTTCACCTACGAGTAGAACTGAAGTTCATTTCGCAAACCTTACCGGATCAAACTTGATGCTTCCTGTTTCTGACTTGGAACAGTCCAATAGTGTTTTAACTAAGAAAGATACATTCTCAAAACTACAAGTTGGAATATCGGTTAATGATCGAAACAGCATCAACGTTAAGAGGGCCGTTCCAGCACATGCGAAAAGACCTGAACAGCCTGCAAAGCACATCAAGAAGAAGGCTAAACCGGGGGAAAGCACTCGTCGGCCAAAAGATCGGCAGCTGATTCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCTCATGGAGGAAAGTGTAGCATCGATTCATTGTTAGACCGCACCATCAGATACATGCTTTTCTTAGGCAGTGTTGTCAAATATGCAGATAAATTACAAGAGCCTAATGAGCCAAAGCTTATTGATCAAGCAAATGGAGTGGCTCCAAAAGACAAAAACCATGGTGCTACATGGGCATTTGAAGTATCAAACCCAACAATGTTATGTCCAATTATAGTTGAGGACATGAATCCACCTGGCCAAATGCTTATCGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAGATAGTCGACATGATTAGAGGTTTCGGGCTGAATATCTTGAAAGCAAAGATGGATTCAAGGAAGAATAAACTATGGGCGCGCTTTATCGTTGAGGCAAATAAACATGTTACAAGGATAGATGTGTTTTGGTCCCTTCTTCATCTTCTACAACAACCAAACTCCGGCGGAATCGATTCTTCTGATAAGCATAACAATGTTATTGATGTCAACCGTAGCAATTAA 2145 0.3925 MEMTMHVSLRNKLKTLCDYGDGWSYAILWRFHQKNPMLLNVEEAYYEEELREEIQKMVPLVHLLGEGIVGEAAFKGKYSWLHSVSCEDDFSMYQQFNSGLIKTIVAIPVKAFGVVQFGSRKKVLETMDFLDQAQSLLKEIDEVDMIKDSENAVLSMDFTNNDLDGLLASFSSENSCDWNLNSANEENYRDLREVFSPCGERITSLEFEENSCFDSLLQQFLSETMAQEVHDSSLASLQNIDDVLFQEKIQNSMDNVVTEVDLPSSSSIINGISNSLELVDMLEEFLKFGSVDDLCEWFAPSPDETTICKTMAQLEKTLSEPIEFNPICSDLGLAEKETSVVMHSSENDFLDNTELDLGIDQGGELWGNLLTPMVNAGTDNTAFSECVSELNTGTPTDNTRKRLFAELGIEELLRGEANYSNPFSRSTFENELSSNKKQMVEFSPTSRTEVHFANLTGSNLMLPVSDLEQSNSVLTKKDTFSKLQVGISVNDRNSINVKRAVPAHAKRPEQPAKHIKKKAKPGESTRRPKDRQLIQDCIKELRGIIPHGGKCSIDSLLDRTIRYMLFLGSVVKYADKLQEPNEPKLIDQANGVAPKDKNHGATWAFEVSNPTMLCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDMIRGFGLNILKAKMDSRKNKLWARFIVEANKHVTRIDVFWSLLHLLQQPNSGGIDSSDKHNNVIDVNRSN 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06037 714 MobiDBLite consensus disorder prediction 502 532 - -
Vivi1g06037 714 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 136 IPR025610 -
Vivi1g06037 714 MobiDBLite consensus disorder prediction 501 532 - -
Vivi1g06037 714 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 518 567 IPR011598 GO:0046983
Vivi1g06037 714 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 705 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06037 Vivi-Chr1 134178836 134182233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06037 510 700 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.125 1.17e-59 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06037 - - vvo:131617309 1211.05