Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04842 ATGAAGTGTATTAAACCTATCATTTTTACTATGTTTATTATTCTATCTATGAATGAAGCTTCTTATGCACAAGAAGAACCTTCTTCTGATGTTACTCCAATGGAGAAACAAGAGCTTGAAGCTTTGTACTCAACCATTCAAGGCTTTGTTGGTGATTCATGGAATGGCTCATCTCTCTATCCAGATCCTTGTGGCTGGAGTCCTATTCAGGGAGTTTCTTGTGATATTTTCAATGGATTTTGGTATGTAACAGTTCTTAACATTGGGCCTATTCATGATAATTCTCTAACATGTTCTGACGAAAAATTGGAATTTAGACCAGAATTATTTAACCTCAAGCACCTTAAAGTTTTAACATTCTTCAATTGCTTTCAATCACCAAATAGTCTTCCGGTTTCAATTCCGACCGGAAACTGGGAGAAATTACGTGAGAACTTAGAGTCAATTGAGTTTAGATCGAATCCCGGTCTCGTTGGCAGCATTCCTTCGTCTTTCGGTGTACTCAGGAATCTTCAGTCAATGATTTTACTCGAGAACGGTTTATCCGGTCGAATACCTCAAGAAATTGGAAATCTTGTGAAACTGAAGAGACTTGTTTTATCCGGAAACAATTTCAGTGGTAATGTTCCGGATAATTTCGGCGGGTTAAGAGATTTGTTAATCCTTGATTTAAGTCGAAACTCGTTATCCGGAACATTGCCTTTAACATTCGGAGGGTTAATTTCGGTATTGAAGATTGATGTTAGTCATAATTTTCTTGAAGGAAAGTTGCTTAATGAGTTTTCAAGGTTGAAGAATTTGACACTATTGGATTTAAGGAACAATAGATTCTGTTGTGGATTGGTTAATTCTTTACAAGAGATGAATTCTTTGGAGGAATTGGTTTTGTCCAATAATCAATTAGGTGGTGATATGAGGAATTTGAGATGGGAGAATCTGAAAAATTTGGTGATTTTGGAACTTTCTAACATGGGACTAAGAGGTGAAATTCCTGAGTCATTGTTTGAGTTGAAGAGATTGAGATTTTTGGGACTTAATGATAATAATCTTACAGGTAAAGTTTCACCTAAGCTAGAATCACTTCCTTCTCTTAATGCACTTTATTTAAGTGGAAATAATTTGAAAGGTGAGATTCAATTTTCAAAAGGGTTTTTTGGTAAATTGGGAAGACGTTTTGGTGCTTGGAGTAATCCTAAACTTTGTGTTCCAGTTGGTGTTATGTCATCAGACAATGTTCCATTTGGGGTGAAGCCATGTCATGAACAAGAAGAAGAGGTTCATTTGGTGAAAGCTGATACAAGAAAAGAGATTCTCAATGGTGATATGAACATGAAGAACAACACTTCTATGGGATTATCTAGTTATGCAAATTGTGGTTTATGGTGGATATTTATGATTTTGGGTCTAGTTCTGAATTGTTATATAGTTTTTTAA 1434 0.3543 MKCIKPIIFTMFIILSMNEASYAQEEPSSDVTPMEKQELEALYSTIQGFVGDSWNGSSLYPDPCGWSPIQGVSCDIFNGFWYVTVLNIGPIHDNSLTCSDEKLEFRPELFNLKHLKVLTFFNCFQSPNSLPVSIPTGNWEKLRENLESIEFRSNPGLVGSIPSSFGVLRNLQSMILLENGLSGRIPQEIGNLVKLKRLVLSGNNFSGNVPDNFGGLRDLLILDLSRNSLSGTLPLTFGGLISVLKIDVSHNFLEGKLLNEFSRLKNLTLLDLRNNRFCCGLVNSLQEMNSLEELVLSNNQLGGDMRNLRWENLKNLVILELSNMGLRGEIPESLFELKRLRFLGLNDNNLTGKVSPKLESLPSLNALYLSGNNLKGEIQFSKGFFGKLGRRFGAWSNPKLCVPVGVMSSDNVPFGVKPCHEQEEEVHLVKADTRKEILNGDMNMKNNTSMGLSSYANCGLWWIFMILGLVLNCYIVF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04842 477 Pfam Leucine Rich Repeat 266 287 IPR001611 GO:0005515
Vivi1g04842 477 FunFam Piriformospora indica-insensitive protein 2 37 209 - -
Vivi1g04842 477 Pfam Leucine rich repeat 194 251 IPR001611 GO:0005515
Vivi1g04842 477 Gene3D Ribonuclease Inhibitor 35 307 IPR032675 -
Vivi1g04842 477 FunFam Piriformospora indica-insensitive protein 2 210 307 - -
Vivi1g04842 477 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 99 455 - -
Vivi1g04842 477 Gene3D Ribonuclease Inhibitor 308 385 IPR032675 -
Vivi1g04842 477 PRINTS Leucine-rich repeat signature 361 374 - -
Vivi1g04842 477 PRINTS Leucine-rich repeat signature 219 232 - -
Vivi1g04842 477 SUPERFAMILY L domain-like 40 378 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04842 91 424 Receptor kinase-like Gene Family AT1G73080 31.152 4.83e-32 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04842 1 104141722 104144131 Vivi1g04842 1 104141722 104144131 ECH