Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04841 ATGACTGATACTACAGATGATATTGCTGAGGAAATCTCCTTTCAGAACTTCGATGATGATTGCAGGTTGCTTGGTAATCTTCTCAACGACATTCTTCACCGTGAAGTTGGTACTACTTTCGTTGATAAACTCGAAAGGATTCGAGTTCTTGCTCAGAGTGCATGTAATATGAGGCAAGCGGGTATTGTGAACATGGGTGAGATACTTGAGAAGCAGTTGGCTTCAGAGTTGTCAAAGATGACGTTACAAGAAGCTTTCACTCTTGCTCGAGCTTTCAGCCATTATCTTACTATGATGGGTATTGCTGAAACTCACCATAGGGTTCGTAAGGGAGGGAATATGGCACAAATTTCAAAATCTTGTGATGATGTCTTTAACCAGCTTGTGCAGGGTGGAGTTTCCCCTGATGATCTTTATAACACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTCACAGCTCACCCCACACAAATTAATCGCCGTACACTTCAGTACAAACACATTCGAATTGCTCATCTCTTGGATTATAATGACCGCCCTGATCTTAGCCCTGAAGATCGAGAAATGCTTATCGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAAAAGCCCACTCCAGTTGATGAAGCTAGAGCTGGTTTGAATATAGTGGAGCAATCACTCTGGAAAGCTGTTCCTCATTATTTGCGTCGAGTCAGCAATGCTTTAAAGAAGCATACGGGAAAGCCACTTCCATTGACTTGCACTCCCATAAAGTTTGGAACTTGGATGGGAGGAGATAGAGATGGAAACCCAAACGTGACGGCAAAGGTCACAAAAGATGTTTCACTTCTATCAAGATGGATGGCAATCGATCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCTATGAATCGGTGCAGCGATACTTTGTCAAGATTGGCACATGAAATCCTAGAAGGAGCTAAAGATGAGAATCGTCGTGAGAGTTGGAATCAATCCATGAATAGAAGTCAGTCACTTCCAACACAACTTCCAGCTAGAGCTCATTTACCCTCTTTTGCTGCAAACGGTGAATCGCAGCATCCTAGACTAGACATTCCAGGACCTGATCACAAGGATGTTGGGATTTCTCCAAACTTAGCTGCAATCAGAACTGGCAATCCTAGTATTCAAGTATCACAAAAAAGTTCAGAAAATTCCAATGCTTCTTCAGCTTCAATTCCATCTTCTCCTTCTTTCATCTCCGGTCAACCACTTTCTCAGAGGAAATTGTTGGCAGAATCCCAAACAGGAAAGTCCGGTTTTCATAAGCTTTTAGAGCCACAGCTCCCTCAACTTGCTGGAATTGCTCCTTACAGAGTTGTCCTGGGAAACGTAAAGGATAAGCTTGAGAGAAGCCGTAGACGGTTAGAACTTCTTCTTGAGGATGTTTCATGTGACTACGATCCTTCGGAATATTATGAAACAGCTGACCAGCTTTTGGAACCTCTGCTCCTCTGTCATGAATCTCTGCAATCATACGGATCCGGGGTGCTAGCTGATGGTCGACTTGCTGATCTCATTCGTAGAGTTGCTACCTTCGGAATGGTTCTAATGAAGCTTGACTTGCGCCAGGAATCGGGGAGACATGCTGACACGCTTGATGCAATTACAACGTATTTGGATATGGGTACTTACAGTGAGTGGGATGAAGAAAAGAAATTAGATTTCTTAACAAGAGAGCTGAAAGGGAAGAGGCCACTAGTTCCTGTTAGTATAGAGGTTCCGGCGGATGTTAAAGAAGTCTTGGATACATTTCAAATTGCTGCTGAACTAGGGAGTGATTCACTTGGAGCCTATGTGATCTCTATGGCCTCTAGTGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAAAAGGATGCGCGGCTTGCTGCTGCTACTGGAGAGTTGGGAAGAGCAAGTCCCGGTGGAACGTTGCGGGTTGTCCCTCTATTTGAAACCGTGAAGGACTTAAGAGGAGCTGGTGCAGTTATCCGGAAACTTTTATCAATAGACTGGTACCTCGAACACATCATTAAGAATCACAACGGTCATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGCCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAATGATTACGGTATTAAAGTTACACTGTTCCATGGCCGTGGAGGCAGTATTGGCCGGGGTGGTGGCCCTACGTATTTGGCTATTCAATCCCAACCACCCGGATCTGTGATGGGAACACTTCGGTCTACTGAGCAGGGAGAAATGGTAGAGGCTAAATTTGGGTTACCACAGATAGCGGTTAGACAACTTGAAATATACACAACTGCAGTACTACTCGCAACTCTTCGTCCACCTCTCCCACCCCGCGACGAAAATTGGCGTAATCTCATGGAAGAAATCTCAGAGATCAGTTGCCAGTGTTACCGCAACGTAGTCTACGAAAATCCAGAGTTCCTTTCCTACTTCCACGAAGCCACGCCCGAAGCAGAACTCGGCTTCCTCAACATAGGTAGCCGTCCTGCAAAAAGGAAGAACACAAGAGGAATCGGAAACCTACGTGCTATTCCCTGGGTATTTGCATGGACTCAAACCAGATTCGTTCTTCCAGCTTGGCTCGGAGTCGGAGCAGGTTTGAAAGGAGCTTGTGAGAAAGGTCATAGCGAGGAACTAAAAGCAATGTACAAAGAATGGCCTTTCTTCCAAAGTACAATAGACCTTATTGAGATGGTTTTGGGGAAAGCAGACACTACTATAGCCAAGTACTACGATGAAGCCCTTGTGTCCAAGGAAAGGCAAGAACTCGGTCGCGAGCTACGAGACGAGCTCTTGACAGCTGAGAAGTTCGTGCTTGTGATTAGTGGCCATGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGTTGGTTGAGAATAGACTTCCATTTCTCAATCCAATGAACCTGTTGCAGGTCGAGATTCTCAAGAGGTTAAGGCGCGATGACGACAACCTTAAACTCAGAGATGCTTTGCTTATCACAGTAAATGGAATTGCTGCTGGGATGAGGAATACCGGTTAA 3126 0.4495 MTDTTDDIAEEISFQNFDDDCRLLGNLLNDILHREVGTTFVDKLERIRVLAQSACNMRQAGIVNMGEILEKQLASELSKMTLQEAFTLARAFSHYLTMMGIAETHHRVRKGGNMAQISKSCDDVFNQLVQGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSPEDREMLIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGTWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNRCSDTLSRLAHEILEGAKDENRRESWNQSMNRSQSLPTQLPARAHLPSFAANGESQHPRLDIPGPDHKDVGISPNLAAIRTGNPSIQVSQKSSENSNASSASIPSSPSFISGQPLSQRKLLAESQTGKSGFHKLLEPQLPQLAGIAPYRVVLGNVKDKLERSRRRLELLLEDVSCDYDPSEYYETADQLLEPLLLCHESLQSYGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHADTLDAITTYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPVSIEVPADVKEVLDTFQIAAELGSDSLGAYVISMASSASDVLAVELLQKDARLAAATGELGRASPGGTLRVVPLFETVKDLRGAGAVIRKLLSIDWYLEHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPLPPRDENWRNLMEEISEISCQCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPAKRKNTRGIGNLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGHSEELKAMYKEWPFFQSTIDLIEMVLGKADTTIAKYYDEALVSKERQELGRELRDELLTAEKFVLVISGHEKLQQNNRSLRRLVENRLPFLNPMNLLQVEILKRLRRDDDNLKLRDALLITVNGIAAGMRNTG 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04841 1041 FunFam Phosphoenolpyruvate carboxylase 1 425 535 - -
Vivi1g04841 1041 Coils Coil 461 485 - -
Vivi1g04841 1041 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 699 711 IPR033129 -
Vivi1g04841 1041 MobiDBLite consensus disorder prediction 328 347 - -
Vivi1g04841 1041 Pfam Phosphoenolpyruvate carboxylase 448 1041 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 Pfam Phosphoenolpyruvate carboxylase 19 328 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Vivi1g04841 1041 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 3 1041 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 MobiDBLite consensus disorder prediction 361 382 - -
Vivi1g04841 1041 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1041 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vivi1g04841 1041 MobiDBLite consensus disorder prediction 395 425 - -
Vivi1g04841 1041 Gene3D Phosphoenolpyruvate/pyruvate domain 289 368 - -
Vivi1g04841 1041 Gene3D Phosphoenolpyruvate/pyruvate domain 398 534 - -
Vivi1g04841 1041 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1041 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04841 Vivi-Chr1 104021692 104027554 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04841 1 104021692 104027554 Vivi1g04841 1 104021692 104027554 ECH