Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04643 ATGCTCGTAGTTCCTCCCAAACCCATCAACACAATCACAATCACCATCATGCTAGCCTTCACCTTCTTCCTCATCTTCTTCTCCTCCGGTTTCCTCCAATTCCCTTCCGTTTCACCCTCTCTCCCGCCCATCCACGAATCCTTCACGCTTCCTTCTACCAATTCCTCCTCCGACCCCTTCACCGATCTGCTTTCTTCCTTCAGGAAATGGGATTCGCGAGTTGGGTGTGCTGAATTCAGAGAGAAAACAAATGGGGTTTTGTTGAATCAGTCAAAGGTTGTTTCTTTGCAAGAGTTTGGTGGTGATTCTGAGTGTAAGAGTTTTAAACTTAATCATGTTAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCGTTGTGGGTTGAGTTGTTTGTGGACCAAATCTAATGTTCTTGCTGATAAGCCTGATGCTTTGTTGTTTGAAACGACTACGCCTCCAATTCAGAGACGTGTGGGAGAACCGCTTCGTGCGTACATGGATCTCGAAGCTGGTCGAAAGAGATCAGGCCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTTCCCTGTTTCACAATGGACGAAACTATCACGTCTCTGATACTAAAAACAGTGAAATACTTGTTTATTGGTCTTCATCGCGGTGTCTTCCTCAAAGAAATGAACTTGCCAAGAAACTCCTCAGCTTGCTACCTATACATTCATTTGGCAAGTGCCTAAACAATGTCGGTGGTCTAGACATGGCTCTTTCCTTCTTTCCAAAGTGTGAAAACGATGCAAATACTAAACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCATTACAAGTTTGTTCTTGCAATCGAGAACACTTTCACCGAGAGTTACGTGACAGAGAAGTTATATTATGCATTGGACTCGGGTGCTGTTCCTATATATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATTAATGGTAGAGAATTCAAATCATTGGAAGAACTGGCTTCGTACGTAAAGGCTGTAGCTAATGACCCGGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTAATGGGTAACTATGCGAAAACACGATCTGTGAGCCTTGACACATTGCCATGCCGGTTATGTGAGGCCGTTAGCAGAAAAGGTGGAAGAAGTGCTAGAAGCTAG 1233 0.4331 MLVVPPKPINTITITIMLAFTFFLIFFSSGFLQFPSVSPSLPPIHESFTLPSTNSSSDPFTDLLSSFRKWDSRVGCAEFREKTNGVLLNQSKVVSLQEFGGDSECKSFKLNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSNVLADKPDALLFETTTPPIQRRVGEPLRAYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGSLFHNGRNYHVSDTKNSEILVYWSSSRCLPQRNELAKKLLSLLPIHSFGKCLNNVGGLDMALSFFPKCENDANTKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIINGREFKSLEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRSVSLDTLPCRLCEAVSRKGGRSARS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04643 410 FunFam Alpha-(1,4)-fucosyltransferase 172 378 - -
Vivi1g04643 410 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 402 - -
Vivi1g04643 410 Gene3D - 172 381 IPR038577 -
Vivi1g04643 410 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 107 402 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi1g04643 410 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 403 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi1g04643 410 PIRSF FucT_plant 4 410 IPR017177 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04643 4 408 Xyloglucan Fucosyltransferase1 AT1G71990 66.995 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04643 K14412 - gmx:100791990 670.618