Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03737 ATGTCCGTCATGAAATTGATCTCGTGTTTGTTTCTATGCACGCTTTCTGTTTGTTGTAATGCTTCTTCACATCGTTCGATCCTTCGTGAGGTTAGCGATATTGATCGAAGTGGAACTGATCGGGATTATGCCGTGGAGCTTAATGCCACTAGTTTTGATGCTGTTTTGAAGGATACTCCTGCTACCTTCGCCATTGTTGAATTCTTTGCACATTGGTGTCCTGCTTGCAGGAATTATAAGCCTCAGTACGAAAAGGTTGCAAGGTTATTTAATGGACCTGATGCAGTGCATCCTGGAATCATATTATTGACAAGGGTGGATTGTGCAGAAAAGATAAATACTAAGCTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTCTTTTGGGGCGCTCCTCCTAAATTTGTAGGTGGTAGTTGGGAACCAAAACAAAAGAATAGTGATATACAGGTGATTGATAATGCACGCACAGCTGATCAATTGCTTACTTGGATCAACAAACAAACGTCCAGTTCGTTTGGTCTGGATGATCAGAAGTTTCAAAACGAGCATCTTTCATCTAATGTATCAGACCCCCAACAGATTGCAAGAGGTATCTATGATGTTGAAGAGGCAACTTCATTAGCTTTTGACATCATCTTGGAGAACAAGATGATAAAACCAGAAACTCGGGGTTCACTTTTAAAGTTTCTCCAACTTTTAACCGCTCATCATCCTTCTAGGAGATGCCGGAAGGGCGCTGGAGACTTGCTTGTGAGCTTTGATGACTTATACCCAACAGAATCTTGGTCATCTCATAAACAAGAAGATGATAAGAGTTTGGTTAAGAACTTTCAGATTTGCGGAAAAGAAGTGCCACGTGGATACTGGATGTTCTGTCGTGGTAGTAAGAATGAAACCAGAGGCTTTAGCTGTGGCTTATGGGTTCTTCTACATTCACTCTCTGTAAGGATCGAGGATGGAGAGAGTCAGTTTACATTTACTACAATCTGTGATTTTGTTCACAACTTCTTTGTCTGCGAGGAATGCCGACAACATTTTTACAAGATGTGTTCAAGTGTTTCTAGTCCTTTCAACAAAGCCCGTGACTTTGCACTCTGGTTGTGGAGTTCCCATAACAAGGTTAACGAAAGGCTGAGGAAAGAAGAAGCTTCTCTAGGTACCGGCGATCCCAAATTCCCAAAGACAGTTTGGCCTCCAAAGCAGCTTTGCTCTTCCTGTTACCTTGACCATGACCAAACAAGCAACAAAATTGAATGGAACCAGGATGAAGTCTACAACGCTCTGAGAAATTATTATGGTAAAACACTTGTTTCTCTGTACAAGGAGAAGGGTATTGCTGGAACCGAAGGAGCTGAAGGAGCCGCCCTAGAAGATTTAACAGTCGGGACAAATGCAGTTGTGGTGCCGGTTGGAGCTGCTTTGGCAATTGCTGTTGCTAGCTGTGCCTTTGGAGCACTCGCATGCTACTGGCGTTCACAGCAAAAGAGTCGGAAGCCAAGGAGAACATGGAATTAG 1521 0.428 MSVMKLISCLFLCTLSVCCNASSHRSILREVSDIDRSGTDRDYAVELNATSFDAVLKDTPATFAIVEFFAHWCPACRNYKPQYEKVARLFNGPDAVHPGIILLTRVDCAEKINTKLCDKFSVGHYPMLFWGAPPKFVGGSWEPKQKNSDIQVIDNARTADQLLTWINKQTSSSFGLDDQKFQNEHLSSNVSDPQQIARGIYDVEEATSLAFDIILENKMIKPETRGSLLKFLQLLTAHHPSRRCRKGAGDLLVSFDDLYPTESWSSHKQEDDKSLVKNFQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIEDGESQFTFTTICDFVHNFFVCEECRQHFYKMCSSVSSPFNKARDFALWLWSSHNKVNERLRKEEASLGTGDPKFPKTVWPPKQLCSSCYLDHDQTSNKIEWNQDEVYNALRNYYGKTLVSLYKEKGIAGTEGAEGAALEDLTVGTNAVVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03737 506 Pfam Thioredoxin 45 129 IPR013766 -
Vivi1g03737 506 Pfam Erv1 / Alr family 306 400 IPR017905 GO:0016972
Vivi1g03737 506 ProSitePatterns Thioredoxin family active site. 65 83 IPR017937 -
Vivi1g03737 506 Gene3D Glutaredoxin 35 195 - -
Vivi1g03737 506 Gene3D ERV/ALR sulfhydryl oxidase domain 292 443 IPR036774 GO:0016972
Vivi1g03737 506 FunFam Sulfhydryl oxidase 29 199 - -
Vivi1g03737 506 ProSiteProfiles Thioredoxin domain profile. 25 171 IPR013766 -
Vivi1g03737 506 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 297 399 IPR017905 GO:0016972
Vivi1g03737 506 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 199 500 IPR039798 GO:0016971
Vivi1g03737 506 FunFam Sulfhydryl oxidase 292 443 - -
Vivi1g03737 506 SUPERFAMILY Thioredoxin-like 44 170 IPR036249 -
Vivi1g03737 506 SUPERFAMILY FAD-dependent thiol oxidase 298 402 IPR036774 GO:0016972
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03737 Vivi-Chr1 79784605 79789132 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03737 1 79784605 79789132 Vivi1g03737 1 79784605 79789132 ECH