Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03688 ATGTATCACCAGCATCATCATCAAAACGGTTCCTTGGAGCGCAGAGCTCAAGCTTCCAACGGAGACATTGCCACTAATAATGCTACCAATGCCAATTCCATAACCAGACTTCTTGGAAACCCTAGAATTGATCACATGCCTGATAATTATGAAGACCTTCCTTTGGATTTCAACCCTCTTGTCTTCACTTCACTCGAGAGACATCTTCCTTCTCATATTCTTAACCTATCTAGAGACCTCAAAGCTCACTACATGTCCAACATTCTACTCCGTTATTTGCCTCATACTGAACGTGTTAGGATGCAAAAGCAGAAGGAATACCGGCAAAAGATCATATTAAATTATCCTCCGCTTCATAAGGAGATATATACTATGCTCAGTGAAAATTTTTTTGCACCCTCATTTCTCAGAGCTATTAAGGAAAATACAGAAGCGAGTTTCAGAAGTATAATGGCAGAACCCTCCAGAGGAATTTATACGTTTGAAATATTTCAACCACATTTTTGTGAAATGTTGGTATCTGAGGTAGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATGCGACCTAATACAATGAATCAATATGGTGCTGTTCTTGATGATTTTGGCCTGGAATCCATGCTTGATAAATTGATGAATGATTTCATACGTCCTATAGCTCGAGTTTTCTTTTCTGAAATTGGTGGATCCACACTGGACTCTCATCATGGTTTTGCTGTCGAATATGGAACCAATAGAGACGTGGAACTTGGGTTCCACGTGGATGATGCGGAAGTCACCTTAAATATTTGCCTGGGAACACAATTTTCAGGCGGCGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACACGTGAATACAGAGACCCAATCAGGGGAGATATTCGATTATCCTCATGTTCCAGGCCATGCAGTTCTTCATTCAGGTCGTCACCGTCATGGTGCTAGACCTACAATATCTGGGAATCGGATTAACTTAATTCTATGGTGTAGAAGTTCGGCGTTTAGAGAGATCAAAAAATACCAGAGAGAATTTCCTAGCTGGTGTGGAGAATGCAGACGCAAGAAGAAGGAGAGAGAGCGTATATCAGTTGCTGCCACCAAAGCGGAGTTACTGAAGAGGGAGCTTAAATCCGCCTCATGA 1155 0.4156 MYHQHHHQNGSLERRAQASNGDIATNNATNANSITRLLGNPRIDHMPDNYEDLPLDFNPLVFTSLERHLPSHILNLSRDLKAHYMSNILLRYLPHTERVRMQKQKEYRQKIILNYPPLHKEIYTMLSENFFAPSFLRAIKENTEASFRSIMAEPSRGIYTFEIFQPHFCEMLVSEVDHFERWVHETKFRIMRPNTMNQYGAVLDDFGLESMLDKLMNDFIRPIARVFFSEIGGSTLDSHHGFAVEYGTNRDVELGFHVDDAEVTLNICLGTQFSGGELFFRGVRCDEHVNTETQSGEIFDYPHVPGHAVLHSGRHRHGARPTISGNRINLILWCRSSAFREIKKYQREFPSWCGECRRKKKERERISVAATKAELLKRELKSAS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03688 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 237 336 IPR005123 -
Vivi1g03688 384 SUPERFAMILY Clavaminate synthase-like 129 345 - -
Vivi1g03688 384 Coils Coil 359 379 - -
Vivi1g03688 384 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 32 373 - -
Vivi1g03688 384 Gene3D q2cbj1_9rhob like domain 155 336 - -
Vivi1g03688 384 SMART p4hc 156 335 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03688 Vivi-Chr1 79061920 79066173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03688 1 79061920 79066173 Vivi1g03688 1 79061920 79066173 ECH