Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03678 ATGAGATCAATTCCCATCTCTCTCTCCCTCTCTGAAACAATCACAACATATCTTTGTCTATCCTGTGATGCAAAAGTCCATTGGGCGAACGAATTGTCCGGCCGCCACCCCCGGACCCTCGTGTGTAACTCGTGCAAATGTCATCTTGCTTATGTTCAGTGCTTGGATCATAAAATGTTAGTCTGTCGAGACTGTGATCGAAATCTGCATGATAGTTCTTCATCGCATTGCAGACGAGCTGTCAAAACATTCATCGGCTGCCCTTCTGCCAAAGAGTTTGCAACACTCTGGGGATTTGAATTTAAGGAGATCGAAAAATGTGTCAATCAGAATGATCAGTTTACATCCGATAACGGGTCTAGCAGTCGACTAGGCCAGATAATGTTCGATGATCAAGAGCGGAAAACGATTCTGCAGCAGATCGCTGGCTTAAAACGGTTTCAGCTAAATGAGGAGAATGATCATTCTACAAAGATAAATGGTCTACACGTGGATGAAAAGTTCAATCAGCAAGCACAAAAATCGCAGGATTTTGCTATTAATCTTCTCGAGGAAGACAATCCTATCGGAGAGGTGAATCCCGAAACCTTCTCGTCTGCGTTTTCTAATCTTGATAATTTGTCTTCATCTTCATCTATGGACCTTCCCTTGAATGGAGAATTGTTTTGGACTTACAAAAGTTCACTTCAAAATAATCAGTTATGGTCCCAAAACATTCAAGACCTGGGAATATGCGAAGAATTTGCTTGTCAAGATGATTTTAACATGCCCGACGTTGACTTAACATTCCAAAACTATGAAGAACTATTCGAAGGAGATCAAGATCCAATTAGAGTCATGTTTGGTGGCAAAGATCTCTCATGTTCTTCTTTAGAGAAAGATTTATCCGTTGATGAGTAA 900 0.41 MRSIPISLSLSETITTYLCLSCDAKVHWANELSGRHPRTLVCNSCKCHLAYVQCLDHKMLVCRDCDRNLHDSSSSHCRRAVKTFIGCPSAKEFATLWGFEFKEIEKCVNQNDQFTSDNGSSSRLGQIMFDDQERKTILQQIAGLKRFQLNEENDHSTKINGLHVDEKFNQQAQKSQDFAINLLEEDNPIGEVNPETFSSAFSNLDNLSSSSSMDLPLNGELFWTYKSSLQNNQLWSQNIQDLGICEEFACQDDFNMPDVDLTFQNYEELFEGDQDPIRVMFGGKDLSCSSLEKDLSVDE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03678 299 ProSiteProfiles Zinc finger B-box type profile. 37 81 IPR000315 GO:0008270
Vivi1g03678 299 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 16 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03678 Vivi-Chr1 78735137 78739359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03678 15 277 C2C2-CO-like Transcription Factor Family AT1G68190 40.602 2.53e-55 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03678 1 78735137 78739359 Vivi1g03678 1 78735137 78739359 ECH