Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03636 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCTGCTTTGCTCAAGAGAGAGATGAAGAGTGAAAGGATGGAGAAGCCTACTGTGAGGATTGGTCAAGCTGCTCAATCTAAGAAAGGGGAGGATTATTTTCTAATTAAGACGGACTGTCAGCGGGTGCCGGGGAACTCTTCAACAGCCTTTTCTGTTTTTGCGATCTTTGATGGACACAATGGAAATGCTGCTGCCGTTTTTACAAGGGAAAATTTGTTAAATCACGTGCTGTGTGCTCTTCCTCGTGGGCTTGGACGAGATGAGTGGTTGCAAGCTTTACCTAGGGCATTGGTTGCTGGATTTGTTAAGACTGATAAGGAATTTCAGAGCCGAGGAGAAACTTCTGGAACCACAGCCACTTTTGTGATTGTTGATCGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCTCGTTGTATACTAGATACACAGGGTGGTGCTGTTACCACCTTAACAGTTGATCACAGACTAGAAGATAATACTGAAGAGAGACAACGTGTTACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTCGGCGGTGCTGAGATTGGTCCTCTACGATGCTGGCCGGGAGGTCTATGCCTCTCTAGGTCCATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCGTATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGAAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTGTTTCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCTGCCATGCAGGTTGTCAAGGAAGCCCTAAGGACAAGGGGGTTAAAGGACGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCATCAACACCGCCCCCGAAAAAGCGGAATAGGCTGAAAGATCTTTTTACGTTCAGGAAGAGATCCCGTGATGCTGCTGGTAAGCTGTCAAAGAAGCTTTCGGCTATAAATATAGTGGAGGAATTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGAAAACACAGGACAATCGACATCTGGCCTTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGCGAAGGTATATCCGTCCACGCAGGTTCAATTTTCTCCACAAGCTCGAAGCCTTGGCAAGGTCCTTTTCTATGTAGTGACTGTCGCAATAAGAAGGACGCAATGGAAGGAAAACGTCCTAGTGGAGTTAAGGTGTCATAG 1290 0.4612 MASGEGRRRHHDLVPLAALLKREMKSERMEKPTVRIGQAAQSKKGEDYFLIKTDCQRVPGNSSTAFSVFAIFDGHNGNAAAVFTRENLLNHVLCALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEDNTEERQRVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPSTPPPKKRNRLKDLFTFRKRSRDAAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRNKKDAMEGKRPSGVKVS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03636 429 SMART PP2C_4 25 295 IPR001932 -
Vivi1g03636 429 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Vivi1g03636 429 Gene3D - 36 301 IPR036457 -
Vivi1g03636 429 PANTHER PROTEIN PHOSPHATASE 38 296 IPR015655 GO:0004722|GO:0006470
Vivi1g03636 429 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Vivi1g03636 429 CDD PP2Cc 43 297 IPR001932 -
Vivi1g03636 429 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Vivi1g03636 429 SMART PP2C_SIG_2 51 297 IPR001932 -
Vivi1g03636 429 FunFam probable protein phosphatase 2C 5 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03636 Vivi-Chr1 78091435 78094717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03636 1 428 PP2C-type Phosphatase Gene Family AT1G68410 79.634 0.0 698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03636 1 78091435 78094717 Vivi1g03636 1 78091435 78094717 ECH