Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03618 ATGGCAACTCACAAACTCGCGTTGATCATTACGAATCCTTCAAACGAAAACGAGTTTCTACTCGTGAAGCAGTCACGTCCTCCCAAATTCAACGACGAAGAATACGATTCTTTCGTTGATTCTGATCTCTGGGACTTGCCTTCCGTGCAGTTGAATCCACTTCAACCAGAATCGGAACCCTCGGTTGAGGTTAAGATTTCTGATTCACGTTCAGAGGAGTTCGATTTCAGGGAATTCGATGTCCGTTCTGCTCTTAACGAGGTGTTTGGACAATTAGGGTTTGGGACGGTTGAAGGGGGAGTGTGGAAGTTTCATAAGTATGTGAAGGAAGCGGCATTCGGACCTGGTTTGCCTGTTAACACGGTTTTTATTGTTGGGAAACTAGTAGATGAGGCCAAGGAGTTATCAGATACGTTTAAATGGATGTCCATTCAAAGCTGTCTTAACTGGCTTCTGGAAGTGATTCCACATGGTGATCGTATTGGACCATTGATAGCTGTTGGTCTTATAAATGACTCGCCTGTTTCTGCAAACCGGAAAGTCCCTCCTGCCATCAACTACCAGGAGTACCCGACTGGTGTTATACTTATTCCTATGGGAAGTAGGACAGCTAGGCCTTTTCAAACAACAAATTTGGTGGTGTTTGCACCTGAGAATGTTCCAAATGCTTCCAAGGATAATACATACATTGCTTCTGGAGACGCACTAATAGTTGATCCAGGATGTTTGTCAGAATTCCATGGAGAGCTAAAGAAAATTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTTACCCATCATCATCGAGACCATGTAGATGGTCTCGCGGTTATACAGAAGTACAATCCTGATGCAATTTTATTAGCGCATGAGAATACCATGCGACGCTTAAGTAAAGGTGATTGGTCACTCGGCTATACCTCGGTTTCTGGAGATGAAGATATTTACATTGGTGGTCAGAAATTGAAAGTTATTTTTGCACCGGGACATACAGATGGCCATATGGCATTGCTTCATGTGAATACACATTCCTTAATCGTAGGTGATCATTGTGTGGGTCAGGGAAGTGCTCTCTTGGACATAAGTGCGGGTGGAAATATGTCTGAATATTTCCAAACCACATACAAATTTCTGGAGCTTTCACCCCATGCTTTGATACCTATGCATGGGAGACTTAATGTCTGGCCAAAGCAGATGTTGTGCGAATATTTAAAGAACCGTAGGAGTAGAGAAGCTAATATCTTAAAAGCTATTGAAGGTGGAGCAAAGACATTGTTTGACATTGTTGCATATGTATATTCTAATGTTGACCGACGTGCCTGGATTGCTGCATCATCAAATGTGAGGCTTCATGTGGATCATCTTGCCGAGCAACATAAATTACCAAAGGATTTCTCTCTAGAAACTTTCAATGCCAGTATCAATGAATTTGGTGACATGTTGGGTAAATTATAG 1458 0.4232 MATHKLALIITNPSNENEFLLVKQSRPPKFNDEEYDSFVDSDLWDLPSVQLNPLQPESEPSVEVKISDSRSEEFDFREFDVRSALNEVFGQLGFGTVEGGVWKFHKYVKEAAFGPGLPVNTVFIVGKLVDEAKELSDTFKWMSIQSCLNWLLEVIPHGDRIGPLIAVGLINDSPVSANRKVPPAINYQEYPTGVILIPMGSRTARPFQTTNLVVFAPENVPNASKDNTYIASGDALIVDPGCLSEFHGELKKIVTALPRRLVVFVTHHHRDHVDGLAVIQKYNPDAILLAHENTMRRLSKGDWSLGYTSVSGDEDIYIGGQKLKVIFAPGHTDGHMALLHVNTHSLIVGDHCVGQGSALLDISAGGNMSEYFQTTYKFLELSPHALIPMHGRLNVWPKQMLCEYLKNRRSREANILKAIEGGAKTLFDIVAYVYSNVDRRAWIAASSNVRLHVDHLAEQHKLPKDFSLETFNASINEFGDMLGKL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03618 485 Pfam Metallo-beta-lactamase superfamily 232 351 IPR001279 -
Vivi1g03618 485 Gene3D - 398 470 IPR036388 -
Vivi1g03618 485 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 215 396 - -
Vivi1g03618 485 PANTHER ENDORIBONUCLEASE LACTB2 139 467 - -
Vivi1g03618 485 SMART Lactamase_B_5a 224 390 IPR001279 -
Vivi1g03618 485 SUPERFAMILY Metallo-hydrolase/oxidoreductase 227 462 IPR036866 -
Vivi1g03618 485 Pfam Beta-lactamase associated winged helix domain 425 461 IPR041516 -
Vivi1g03618 485 Gene3D - 218 397 IPR036866 -
Vivi1g03618 485 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 398 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03618 Vivi-Chr1 77844822 77853744 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03618 1 77844822 77853744 Vivi1g03618 1 77844822 77853744 ECH