Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03612 ATGGATAACAATCACCATAATCACTACAACAATAAAACAACCTCCCAAACACGCCTTAAGCTCTTCGGCTTCCACGTCCAAGAAGACGAAACCATGCAAGATATTCTTCAACAAGACTCAACAAACAAAGCCACTTCAACTTCCCCTTCAACCTCAACTTCCCCTTCAAGATCACCGGAATCCTCCGGTGTCGGCGAAGCCTTTCCACCTTCCTCCGGTGAGAGAAAATACGAGTGTCAATACTGTTGTAGAGAGTTCGCAAACTCACAAGCACTTGGTGGACACCAAAACGCGCATAAGAAAGAGCGTCAACAACTCAAACGTGCTCAGTTACAAGCTAACCGAAACGCCGCCGTTTCGTTTGTTCGAAACCCTATGATCTCCGCCTTTGCTCCTCCGCAGCACTTGCTTGCTCCGCCAGGGTCCATGATGGTTCCACCTTCCTCGTGGGTTTACGTGCCGCCGCGTTCTGCTCCTCCGCCCTTCCACGTGTCGGTTTCTCACGGCTGCGTTTTTCCGTCGGGAAACGGTAACGGAAACACCATGATGAGTAGCAACAATAATAGTAGTAATAACTTTGCGGGTGCGGGGATGTTTCCGTGTGTTGGCGTTGTAGGGGATTCAGCGTCCACATTGTCAACGATGCAGGTACAAGGACGGGCCCACATGATTGATGGGCCCTGTTTGAGTAGGTTCAGTGGGCCCAATTTTGATGATTCATTGGGCTTGGATTTGCATCTTAGTCTTGCGCCAGCTGCGGCTCCGTCATACGGCTCGGCTCAGCTTGGTTATTCTAGATGCTCCCCTTAG 810 0.5049 MDNNHHNHYNNKTTSQTRLKLFGFHVQEDETMQDILQQDSTNKATSTSPSTSTSPSRSPESSGVGEAFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRNAAVSFVRNPMISAFAPPQHLLAPPGSMMVPPSSWVYVPPRSAPPPFHVSVSHGCVFPSGNGNGNTMMSSNNNSSNNFAGAGMFPCVGVVGDSASTLSTMQVQGRAHMIDGPCLSRFSGPNFDDSLGLDLHLSLAPAAAPSYGSAQLGYSRCSP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03612 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Vivi1g03612 269 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Vivi1g03612 269 MobiDBLite consensus disorder prediction 37 72 - -
Vivi1g03612 269 FunFam Zinc finger protein 6 69 127 - -
Vivi1g03612 269 MobiDBLite consensus disorder prediction 37 61 - -
Vivi1g03612 269 PANTHER ZINC FINGER PROTEIN 5 5 253 IPR044299 GO:0010090
Vivi1g03612 269 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Vivi1g03612 269 Gene3D Classic Zinc Finger 66 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03612 Vivi-Chr1 77761787 77762721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03612 9 253 C2H2 Transcription Factor Family AT1G68360 47.308 8.85e-53 170
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03612 1 77761787 77762721 Vivi1g03612 1 77761787 77762721 ECH