Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03587 ATGCCTACAACAACACCTTCATTTCTCTCACCAAACCCTCAACGTTATTATTATCACCAACCCATTAAATTTCACCACTCTTCATACACCCTCTACACTCCCTCCTCCTCCACCACCACCACCACCCGCACCAGGCCCCACTGGCCTCGCATGGAAATCGCCTCCTCCCGCCACCGCCGGAAAGACAAAGTCCTTGTCATCATGGGCGCCACCGGCTCCGGAAAATCCCGCCTCTCAGTAGAACTCGCCAACCTCTTCCCCTGTTTCGAAATAATCAACTCCGATAAAATACAAGTCTACAAAGGACTCGACATCACCACCAACAAGATCCCATTTCATCAACGCAACAACGTCCCACATCATCTCCTCGGCGATATCGATCCCTCCCACGGCGAGTTCTCCCCTTCAGATTTCCGCCGCCACGCCGGAGATATTATCTCCGATATAACTTCCCGGAGAAAGCTCCCCATTATCGTCGGAGGGTCCAACTCATTCATTCACGCTCTCCTCGTAGAACGATTCAACCCTGAGTCAAAAGTCTTCGATGAAGACTCTTCATCTTCATCATCATCAAAAACAATCTCCTCGGATTTAAGGTACAAATGTTGTTTTCTCTGGATGGATATATCGTTTCCTGTGTTATCCGAATATTTGCTGAAACGAGTCGACGACATGTTTGACTCTGGAATGGTGGACGAGTTAGCTGAGTTTTACGAACCGGGTTCGGATAACCCGGATAACCGAACCGGGTTGAGAAAAGCTATCGGAGTACCCGAGTTCGAACATTTTTTCAATCAATATCCACCAGGTGGACTTCCCATTGAAGACGAAGTTCATAATCCAATGCGGGAAGGTGCATACGATGAAGCAGTGAAGGCGATTAAAGATAACACGTGTCAGCTTGCCAAGAGACAGATAGGGAAGATCCTACGGTTAAAACGAGCTGGGTGGGACCTACGGAGACTTGACGCCACGGAGGCGTTTAGGGCGGTGCTGACGTCAGATTCTCACGGCGGAGACGGCGGAGGAGAGGAGTTTGCCGGTGTATGGAAAAAACAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGCGATTCTTGATGGAGTAG 1107 0.4932 MPTTTPSFLSPNPQRYYYHQPIKFHHSSYTLYTPSSSTTTTTRTRPHWPRMEIASSRHRRKDKVLVIMGATGSGKSRLSVELANLFPCFEIINSDKIQVYKGLDITTNKIPFHQRNNVPHHLLGDIDPSHGEFSPSDFRRHAGDIISDITSRRKLPIIVGGSNSFIHALLVERFNPESKVFDEDSSSSSSSKTISSDLRYKCCFLWMDISFPVLSEYLLKRVDDMFDSGMVDELAEFYEPGSDNPDNRTGLRKAIGVPEFEHFFNQYPPGGLPIEDEVHNPMREGAYDEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLRRLDATEAFRAVLTSDSHGGDGGGEEFAGVWKKQVLEPSVKIVKRFLME 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03587 368 CDD NK 64 116 - -
Vivi1g03587 368 Gene3D - 61 366 IPR027417 -
Vivi1g03587 368 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 61 366 IPR039657 -
Vivi1g03587 368 Pfam IPP transferase 98 174 - -
Vivi1g03587 368 Pfam IPP transferase 192 306 - -
Vivi1g03587 368 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 211 319 - -
Vivi1g03587 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03587 Vivi-Chr1 77307359 77309446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03587 67 216 C2H2 Transcription Factor Family AT2G27760 39.474 4.51e-27 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03587 1 77307359 77309446 Vivi1g03587 1 77307359 77309446 ECH