Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03533 ATGACTACTCTCACCTCAAATCTAACCCTTATCACCCAACATGGTACTAAAAACCATCAACAAAACCATGGTTCCTCCATTGTTGAAGAAATCAAAGGTCTTATTAAAGTACACAAAAATGGATACATAGAACGACCCAATATTGTTCCATGTGTCACACCTGATTTAAGTCCAAATTTGAATGTGATCTCAAGAGACATAATCATTGACAATGTTACAAACATTTGGGCACGTTTCTATGTTCCAAATTCTCAACAGAAAAAACTACCTTTGTTGGTGTATTTTCATGGTGGTGGTTTCTGTGTTGGTTCTGCAGCTTGGAGTTGCTACCATGAATTTCTTGCCATGCTATCTTCCAAACTCGGTTGCATAATCATGTCGGTTAATTATAGATTAGCACCAGAAAATCCTCTTCCAGCACCTTATGATGATGGCTTCAATGCACTAACATGGTTGAAAAAACAATCTCTATATCAAAATGATGCTAGTACTAGTAGTGAATTTGAATGGTGGACTAAAAAATGCAACTTTTCTAGTATCTTCTTAGGAGGTGACAGTGCTGGAGGTAACATAGCTTATAATGTTGCCAAAAGGGTAGATTCAAATTCAAGTGAGGATGCTTTTTTAAGGCCTTTGAATTTGAAGGGTCTTATTTTGATACAACCATTTTTTGGTGGAAAAGAAAGAACATTATCTGAGAAGTGTATGGTTCAATTATCTGGTTCTGCTTTGAATTTAGCAGCTTCTGATGCTTATTGGCGATTAGCGTTACCGTACGGTGAAGATCGTGATCATCCGTGGTGTAATCCATTGGTGAAATTGGAGGGATTGAAGATGAATGTGTTGGTGTGTGTATCTGAGATGGATATATTGAAGGATAGGAACTTGGAGTTTTGTGATGGTTTGAGAAGAATAGGTGAAAGAGTTGAATATGAAGTGTTTGAAGGTGTTGGGCATGCTTTTCAGATTCTGAGTAAATCAGAGGTTTCTAAGATAAGAGTTGTTCAAATGATGGATAGTCTCAGATCCTTCATGTTGGGTCTTTGA 1047 0.3715 MTTLTSNLTLITQHGTKNHQQNHGSSIVEEIKGLIKVHKNGYIERPNIVPCVTPDLSPNLNVISRDIIIDNVTNIWARFYVPNSQQKKLPLLVYFHGGGFCVGSAAWSCYHEFLAMLSSKLGCIIMSVNYRLAPENPLPAPYDDGFNALTWLKKQSLYQNDASTSSEFEWWTKKCNFSSIFLGGDSAGGNIAYNVAKRVDSNSSEDAFLRPLNLKGLILIQPFFGGKERTLSEKCMVQLSGSALNLAASDAYWRLALPYGEDRDHPWCNPLVKLEGLKMNVLVCVSEMDILKDRNLEFCDGLRRIGERVEYEVFEGVGHAFQILSKSEVSKIRVVQMMDSLRSFMLGL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03533 348 SUPERFAMILY alpha/beta-Hydrolases 26 325 IPR029058 -
Vivi1g03533 348 Pfam alpha/beta hydrolase fold 92 322 IPR013094 GO:0016787
Vivi1g03533 348 Gene3D alpha/beta hydrolase 34 346 IPR029058 -
Vivi1g03533 348 PANTHER ARYLACETAMIDE DEACETYLASE 29 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03533 Vivi-Chr1 75505324 75506587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03533 18 345 Carbohydrate Esterase AT5G16080 53.754 1.66e-120 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03533 1 75505324 75506587 Vivi1g03533 1 75505324 75506587 ECH