Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03532 ATGCAAAGGTTCAACTCAACAAGTGAATCACCTTCACCACTCTATTCTCATTCTTCATTCCTGTTGAGGGGAGATGAACCTAATCTTAATCCAACACGTTTCTTTGATCCTCAACTTTCATTTCAACAACACTATGCTGTTGATTTAAGTTCTATGTTTGGTGCAAAGTCTAACAATGATGCTGTTGCAGCAAGTAACTTGCAGTATGGAACATTCAACACTAATTTTGGTTCAGCTTCTTCTTCAGGCATGGGAGATAATACTCAAAAGACTGAAGATACTTCAACAGAAGATATCGATACTGATGATAAAATCAATCAATGTTTCTCTACTGTGTCTTGGTGCAATGGTGTTGAGAATGAGGGTCTTGTGGTTGTTGATTCCAAGGAGCAATGTAAGACTAAGGATAAATCTGAAGAGCAGAAGAATCTTCGTAGGCTGGTTCAGAATCGCGAGGCTGCGAGGAAAAGTCGATTAAGGAAAAAGGCATACGTGCAACAACTGGAGAATAGTCGACTTAAGCTTGCTCAAATAGAGCAAGAGCTTCAACAAGTACATCAGCAGGGTGCATTTGTTGCAAACGGAGTCGCAGCGGATCATGGTCATTCGGTTGGTGGAAGCAGTAATTCAGGCGCGTTAGCGTTTGATATGGACTATGCCCGTTGGGTCGATGAACATCAACGACTAATCGATGGCATAAGATCAGCTATAAATTCACAAATGGGTGATAATGAACTTCATCTTCTTGTGGATGGTGTCATTATGCATTATGATGAGTTATACAGATTGAAGCGCATAGGTGCGAAAGCCGATGTATTTCACATACTTTCGGGCTTGTGGATAACACCTGCAGAAAGATGCTTCATGTGGCTCGGTGGATACCGCTCGTCCGAACTTCTCAAGATAGTTAGAAACCATCTCGATCCGTTAACGGATCAGCAGTTGATGGGAATCTACAACCTGCAGCATTCTTCTCAACAAGCCGAGGACGCATTATCTCAAGGCATGGAAGCATTGCAACAATCCCTTTCCGAAACGCTTTCATCCACCACCAACGGATCTGGAAATGTCGCCGAGTATATGGGCCAAATGGCCATTGCAATGGCCAAACTAGCCACACTAGAGACTTTCATTCATCAGGCTGATCTCTTGAGGCAACAAACACTCCAACAGCTGCGTCGAATTTTGACCGCGCATCAAGCTGCCCGCGCTCTCGTCGTTCTAAATGACTACGTTTTGCGAATTCGAGCACTGAATTCATTATGGTTAGCATGTCCTAAAGAATCACATTAG 1293 0.4323 MQRFNSTSESPSPLYSHSSFLLRGDEPNLNPTRFFDPQLSFQQHYAVDLSSMFGAKSNNDAVAASNLQYGTFNTNFGSASSSGMGDNTQKTEDTSTEDIDTDDKINQCFSTVSWCNGVENEGLVVVDSKEQCKTKDKSEEQKNLRRLVQNREAARKSRLRKKAYVQQLENSRLKLAQIEQELQQVHQQGAFVANGVAADHGHSVGGSSNSGALAFDMDYARWVDEHQRLIDGIRSAINSQMGDNELHLLVDGVIMHYDELYRLKRIGAKADVFHILSGLWITPAERCFMWLGGYRSSELLKIVRNHLDPLTDQQLMGIYNLQHSSQQAEDALSQGMEALQQSLSETLSSTTNGSGNVAEYMGQMAIAMAKLATLETFIHQADLLRQQTLQQLRRILTAHQAARALVVLNDYVLRIRALNSLWLACPKESH 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03532 430 Coils Coil 161 188 - -
Vivi1g03532 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 184 IPR004827 GO:0003700|GO:0006355
Vivi1g03532 430 Coils Coil 137 157 - -
Vivi1g03532 430 Pfam bZIP transcription factor 139 174 IPR004827 GO:0003700|GO:0006355
Vivi1g03532 430 PANTHER TRANSCRIPTION FACTOR TGA9 84 428 - -
Vivi1g03532 430 SUPERFAMILY Leucine zipper domain 142 184 IPR046347 GO:0003700|GO:0006355
Vivi1g03532 430 Gene3D - 142 190 - -
Vivi1g03532 430 ProSiteProfiles DOG1 domain profile. 212 425 IPR025422 GO:0006351|GO:0043565
Vivi1g03532 430 FunFam BZIP family transcription factor 141 190 - -
Vivi1g03532 430 Pfam Seed dormancy control 232 304 IPR025422 GO:0006351|GO:0043565
Vivi1g03532 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 145 160 IPR004827 GO:0003700|GO:0006355
Vivi1g03532 430 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03532 Vivi-Chr1 75489645 75493692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03532 4 428 bZIP Transcription Factor Family AT1G68640 51.613 7.24e-140 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g03532 DOG1 5.9e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03532 1 75489645 75493692 Vivi1g03532 1 75489645 75493692 ECH