Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03530 ATGATGGATTCTCCCACTATCTCCTCTTCCTCCTCTGAGTTTTCTTCCATAGCCACCGCTGATCAGAGTGCAGCCCGGAGTAGGAGAAGTGGCGGCGGCAGTGAAGTGGTGGCTACGGAACAATTGCGACGGTGGCATGATGTTTTCTGGTTAGGAATATTTGTGATCCATTTGATTGGACTAGGATTCCTTCTTGGGGTTCTTGGCTTCAATAGGTTTGAGATAGAGAATAGACTTGACATTGATAAGTACACCTCGGGTCTTTCGGGGAATGAAGCTGGGTTGACCGAGACTTACTGGCCGCTCTATGGGGCTGCTGGTGGGATTGGGACTGTTCTTGGATGGACTTGGTTGTTGTTGTTGGGTTCCCGGGCTACTCAAATGATGAAGGTCTCTGTTCACATCCTGACCACTTATCTCGCTGTCATCAGTGTTTTGTGTTTCTGGACCGAGCAGATTTTCTGGGGGGTTGCTTTTGCTATCGGTGCTGCTCTCCAGTTCTTGTATGTTATATCCGTCATAGACAGACTTCCATTTACGATGTTGGTTTTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCCGAGGTTATGAGAGTATCATATGCATTTATGTTTGTTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCGAACTTGAGTGACGGGGGACGCTGGTGGCTTCTTGTGATTTTCTCTGTAAGCTTATTTTGGACAGGTGCAGTGCTCTGTAATACCGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTCTCCATGGTGGCAGAGAGGCTGCTTCAATTCCTGCTAACTCATTAACAAAATCTTTACAGTATGCTTTAACGACATCTTTTGGTAGCATTTGTTATGGCTCGTTATTCACTGCTGCTATTAGGACACTGCGATGGGAGATACGTGGACTTCGGTCAAAGATTGGCAACAATGAGTGTTTGCTTTGTTGTGTTGATTTCCTTTTTCATCTTGTGGAGACTCTCGTTCGATTTTTTAACAAATATGCCTATGTTCAGATAGCTGTTAACGGTAAAAGCTTTAACCATTCAGCTAGAGATGCTTGGGAGCTATTTCAGTCAACCGGGGTTGAAGCACTTGTGGCGTATGATTGTTCAGGCGCTGTCCTGCTAATGGGCACTGTTTTTGGTGGATTGATAACCGGAACTTGCTCTGGTGCATGGGCATGGGTTAAATGGAGTGACCGAGTTATTATGATTGGCTCCACATCCATGCTGATGGGAATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAAAGTGCTGTTACGTCGATATATATTTGCTATGCAGAAGACCCTTTATTAATTCAGAGATGGGATGCTGAATTTTTCAACCAGATGTCGGAGACACTACATCACCGACTTCAATATCGGAGTGCTCGAGCCAGAGAAGTTTTAACCCATTATCGACTCAATGACGATCCTATACGAGAAAACACAGCTATTTGA 1506 0.4495 MMDSPTISSSSSEFSSIATADQSAARSRRSGGGSEVVATEQLRRWHDVFWLGIFVIHLIGLGFLLGVLGFNRFEIENRLDIDKYTSGLSGNEAGLTETYWPLYGAAGGIGTVLGWTWLLLLGSRATQMMKVSVHILTTYLAVISVLCFWTEQIFWGVAFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFVVLLWMALWSFGAAGVVASNLSDGGRWWLLVIFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAASIPANSLTKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGAWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHHRLQYRSARAREVLTHYRLNDDPIRENTAI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03530 501 Pfam Plasma-membrane choline transporter 158 452 IPR007603 GO:0022857|GO:0055085
Vivi1g03530 501 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 15 476 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03530 Vivi-Chr1 75475646 75478655 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03530 1 75475646 75478655 Vivi1g03530 1 75475646 75478655 ECH