Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02250 ATGGCTCCTTCTATGGCAACAATTTACACACTCTCCTTACTTTTCTCATTAGCTTATTCAGCATCATCTGCAGAAGAATCTGCCAGACCCTTCAAAAAAATATACGCCTTTGGAGACTCTTTCACAGACACCGGCAACACCCAAAACGCCGAAGGCCCAAGTGGTTTTGGCCATGTATCAAACTCTCCATACGGCACAACTTTCTTCAACCATTCCACAAACAGATACTCTGATGGAAGACTTGTCATTGATTTTGTGACTGAATCACTTTCCATGCCTTATCTTCCGCCTTACCGTCACTGGCGTCGCACCAAAGGAAATGATACTTTTGGTGTTAACTTTGCTGTTGCTGGTTCAACCGCTATAAACCATCAGTTCTTTGTTAGGAACAATCTTTCTCTTGATATCACTCCTCAGTCTATTCAAACTCAGATGCTGTGGTTTAATAGGTACTTGGATAGAGAAGGATGTGAAGGCGTTGATTCGAAGTGTAAAGACTTTGATGACACTCTTTTTTGGTTCGGTGAGATCGGTGTTAATGATTATGCTTACACTCTCGGATCTTCAATTTCACAGGATACCATAAGAAAGCTCGCAATTTCCAGTGTCACAGGAGCTTTACAGACATTGTTAGAGAAGGGTGCCAAGTACATGGTTGTGCAGGGTTTTCCACCAACCGGATGTCTTCCGTTGGCGATGTATTTATCGCCTGAAGATGACAGAGACGACATCGGATGTGTGAAAACTGCTAACGATCAAAGCAACAACCACAACCTAGTACTTCAATCTAGATTACAAGAATTCAGAAAACAATATCCACATGCAGTTATAGTCTATGCTGATTACATGAATGCGTACCGAACTGTTATGCAGAATCCAAGCAAGTACGGATTCAAAGAGACGTTCAGAGTGTGTTGTGGATCAGGAGATCCACCGTACAATTTCAGTGTGTTTGCAACTTGTGGTACACCTAATGCCACCGTTTGTGCTGGTCCTACTCAGTATATTAATTGGGATGGTGTTCATCTTACAGAAGCCATGTATAAAGCTGTTTCTGATATGTTTCTGAAAGGCAACTTTACTCAACCTCCTTTTGATTTTTTGGTGGAAAACAAAGAGAGGAATGGGTGA 1131 0.4182 MAPSMATIYTLSLLFSLAYSASSAEESARPFKKIYAFGDSFTDTGNTQNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVTESLSMPYLPPYRHWRRTKGNDTFGVNFAVAGSTAINHQFFVRNNLSLDITPQSIQTQMLWFNRYLDREGCEGVDSKCKDFDDTLFWFGEIGVNDYAYTLGSSISQDTIRKLAISSVTGALQTLLEKGAKYMVVQGFPPTGCLPLAMYLSPEDDRDDIGCVKTANDQSNNHNLVLQSRLQEFRKQYPHAVIVYADYMNAYRTVMQNPSKYGFKETFRVCCGSGDPPYNFSVFATCGTPNATVCAGPTQYINWDGVHLTEAMYKAVSDMFLKGNFTQPPFDFLVENKERNG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02250 376 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 362 - -
Vivi1g02250 376 CDD SGNH_plant_lipase_like 34 359 IPR035669 -
Vivi1g02250 376 Pfam GDSL-like Lipase/Acylhydrolase 34 353 IPR001087 GO:0016788
Vivi1g02250 376 SUPERFAMILY SGNH hydrolase 31 356 - -
Vivi1g02250 376 Gene3D SGNH hydrolase 19 358 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02250 Vivi-Chr1 47457277 47458757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02250 20 358 Acyl Lipid Metabolism Gene Families AT4G10950 25.926 2.17e-28 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02250 1 47457277 47458757 Vivi1g02250 1 47457277 47458757 ECH