Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01916 ATGAATATGCTGATAAAGAGAGTCATTGCAATCAAGAATCCAAGGGCTGATAATAATAAGCTCTCAGATTTGGAAACCCTCACCGACAAATGTGCAACATCTCCTTTGACTTTGATGCGTGTAATGGGTTTCTTCGTTGTTTCTTTCATGCTTTTCTCTGTTCTCTTCTCACTCTCTGTTGTTCTTCGAGATCCTCCCTCTGATGCTGCACTCTCTTCGACAACTACTCTCTTCCAAGTCAATCAAGGTTTGGGCAGTGATGACGACTTTGATTCTGTTGAGTTGCTAAACGATAAACTGCTTGGTGGCCTTCTCACTGATGGATTTGACGAAAAATCTTGTCTCAGCAGGTATCAGTCGGCCATTTTCGGCAAAGGACTATCAGGAAAACCTTCTTCTTATCTTATTTCTAGATTGAAAAAATATGAAGCTCGACACAAACAATGTGGCCCTTATACCGAATCTTACAACAAAACGGTGAAAGAACTCGGTTCTGGTCAATTTTCCGAGTCCTTGGATTGTAAATATGTAGTATGGATTTCGTTTAGTGGCTTGGGAAATAGGATATTGACCCTAGTTTCAGCATTTCTTTACGCTCTCCTCACTGATCGTGTTCTACTGGTTGACCCTGGAGTGGATATGACTGATCTATTTTGTGAACCTTTTCCCGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTTAACAGTCATTTGAATAATTTCAACCAGGAATCGAATCAGTGTCACGGGAAAATGCTGAAAACGAAATCAATTACAAATTCCACTGTGCCATCTTTTGTTTATCTTCATCTAGCCCATGATTATGATGATCATGACAAGCTTTTCTTCTGCGACGAAGAGCAACTTTTTCTCCAAAATGTACCCTGGTTAATCATGAAAACAGATAATTATTTCATCCCATCTCTGTTCTTGATGCCATCTTTCGAGCAGGAGTTGAATGATCTCTTTCCAAAGAAAGAAAAAGTTTTCCATTTCTTGGGTAGATATCTGTTACACCCCACAAACAATGTGTGGGGACTTGTTGTCAGATACTATAATGCATACTTAGCTAAAGTTGATGAAAGAATAGGCATACAAATCAGAGTGTTCGACACCGATCCCGGTCCATTTCAACATGTACTGGATCAGGTCTTAGCTTGTACTTTGAAGGAGAGTATTTTGCCTGATGTTAACCGCGAGCAGAATATTAATAGTTCATCAGGAACACCAAAGTCAAAAGCTGTACTGATAACATCGTTAAGTTCTGGTTACTTTGAAAAGGTGAGAGACATGTATTGGGAATATCCTACAGAAACGGGAGAAGTCGTTGGCGTTTACCAGCCAAGTCATGAAGGTTATCAACAAACTCAGAAGCAGTTTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTAGTTACTAGCTCATGGTCTACTTTCGGCTACGTCGCTCAGGGGCTTGGAGGTTTGAAACCATGGATACTTTACAAACCAGAGAATCGAACGGCCCCAAATCCGCCTTGTCAACGTGCCATGTCAATGGAGCCATGTTTTCATGCTCCTCCTTTTTATGACTGCAAGGCTAAGAGAGGAACTGACACTGGTGCACTTGTTCCACATGTAAGGCACTGCGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAATTAG 1692 0.4125 MNMLIKRVIAIKNPRADNNKLSDLETLTDKCATSPLTLMRVMGFFVVSFMLFSVLFSLSVVLRDPPSDAALSSTTTLFQVNQGLGSDDDFDSVELLNDKLLGGLLTDGFDEKSCLSRYQSAIFGKGLSGKPSSYLISRLKKYEARHKQCGPYTESYNKTVKELGSGQFSESLDCKYVVWISFSGLGNRILTLVSAFLYALLTDRVLLVDPGVDMTDLFCEPFPDASWFVPPDFPLNSHLNNFNQESNQCHGKMLKTKSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQLFLQNVPWLIMKTDNYFIPSLFLMPSFEQELNDLFPKKEKVFHFLGRYLLHPTNNVWGLVVRYYNAYLAKVDERIGIQIRVFDTDPGPFQHVLDQVLACTLKESILPDVNREQNINSSSGTPKSKAVLITSLSSGYFEKVRDMYWEYPTETGEVVGVYQPSHEGYQQTQKQFHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01916 563 FunFam Galactoside 2-alpha-L-fucosyltransferase 172 223 - -
Vivi1g01916 563 Gene3D - 172 225 - -
Vivi1g01916 563 Pfam Xyloglucan fucosyltransferase 91 534 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi1g01916 563 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 562 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01916 Vivi-Chr1 40634664 40638008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01916 39 561 Xyloglucan Fucosyltransferase1 AT2G03220 62.524 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01916 K13681 - gmx:100803305 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01916 1 40634664 40638008 Vivi1g01916 1 40634664 40638008 ECH