Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi11g00028 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAAGCAAATCAACATCAGTTGCTTCCATCACTATCCTCACAGCAACATGGTGCAGGCTCAATAATCAGGCCTGGTTCGATACCGAATCAAGTTCAAGTTCAAGCTCAAGCTCAGGCTCAAACAGGCCAGACTCAGGACGTTCAAACAGGTCAGACTCAGGCTCAGGCTCAGATAGCTAAATTACCGCAACCAGAAACAGCTTTAAAGTGTCCTCGTTGCGAATCAACCAACACGAAATTTTGTTACTACAACAACTATAACTTATCTCAACCAAGACACTTTTGTAAGACGTGTAGGCGATACTGGACGAGAGGGGGTGCATTGAGAAATGTTCCGGTTGGTGGAGGGTGCCGGAGAAGCAAGAAAACCAAAAAGAGTAACACCACTACTACTACTCCTTCCAAATCTTCAATATCTAATGGTAGTGAAAAAGATTATTCAACAAGTGCAATCCATTCAACTTCAACACCTTTTGGAGAATTCTTGAATCCAAGTAACAAAACCTACATGAACATGACATCTCTTCAGAATCTGAGTCGCTACGGTGTTGGAAACGTTGCTAATATGGGGTTTCAGATTGGAGATTATAGTGGAGGTGGAGAAGGTGGTGGCGGAGTTGTGGATCAGTGGCGGTTTCAGCAATTTCCTTTCATGAATAATGGTTTTGAATCAACTACTTCAAATGTTTCTTTCCCATTCCAAAGTGAAATTGTTGAACCACAAACTTCTTCTAGGGCTAATACTCCGATGATGACTGCATCGGTTAAATCCGAACACTACGGAGGTTTGAACTTCTTAAGATCTCCTCTGAGCGTCTCCGAGAATCACAACAACCATTACAATTCATGGCCTGATTTTTCTGGTCTCGCATCTTCTTCTGCTAGTCGTCTGTTGTAA 948 0.4219 MVFSSIPSYLDPLNWQQQANQHQLLPSLSSQQHGAGSIIRPGSIPNQVQVQAQAQAQTGQTQDVQTGQTQAQAQIAKLPQPETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTTTTTPSKSSISNGSEKDYSTSAIHSTSTPFGEFLNPSNKTYMNMTSLQNLSRYGVGNVANMGFQIGDYSGGGEGGGGVVDQWRFQQFPFMNNGFESTTSNVSFPFQSEIVEPQTSSRANTPMMTASVKSEHYGGLNFLRSPLSVSENHNNHYNSWPDFSGLASSSASRLL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi11g00028 315 ProSitePatterns Zinc finger Dof-type signature. 87 123 IPR003851 GO:0003677|GO:0006355
Vivi11g00028 315 MobiDBLite consensus disorder prediction 129 167 - -
Vivi11g00028 315 Pfam Dof domain, zinc finger 84 139 IPR003851 GO:0003677|GO:0006355
Vivi11g00028 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 251 IPR045174 GO:0003700|GO:0006355
Vivi11g00028 315 ProSiteProfiles Zinc finger Dof-type profile. 85 139 IPR003851 GO:0003677|GO:0006355
Vivi11g00028 315 MobiDBLite consensus disorder prediction 143 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi11g00028 9 237 C2C2-Dof Transcription Factor Family AT3G55370 41.079 4.32e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi11g00028 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi11g00028 - - vvo:131621323 551.592