Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03799 ATGGCTTTCTCCTCTAAGCTACTTCTTCTTGCTTCCTTCTGCCTATTTGCGTCTTTATCTTTTGGCCGCGATTTCTCCATTGTGGGCTATTCATCTGAGGACTTAAAGTCCATGGATAAACTCATTGAACTCTTTGAATCGTGGATGGCAAGACACAGCAAGATCTACGAGACCATTGAGGAGAAACTTCTAAGGTTTGAGATTTTCAAGGATAACCTAAAGCACATAGATGAGAGGAACAAGGTGGTCACCAACTACTGGCTTGGCTTGACTGAGTTTTCTGATTTGAGCCACCAAGAGTTCAAGAACAAGTATCTTGGTCTCAAGGTTGACTACTCTCGAAGGAGAGAATCCCCAGAAGAGTTCACTTACAAGGATGTTGAATTGCCAAAGTCAGTGGATTGGAGAAAGAAGGGTGCTGTAACGCAAGTCAAGAACCAAGGTTCATGTGGTAGCTGCTGGGCATTTTCCACTGTTGTAGCAGTTGAGGGAATAAACCAGATTGTGACCGGAAATCTGACATCGCTGTCTGAACAAGAGTTGATTGACTGTGACAGAACATACAACAATGGTTGCAATGGGGGTCTCATGGACTACGCATTCTCGTTCATAGTAGAAAACGGTGGACTCCACAAAGAGGAAGATTATCCTTACATCATGGAGGAAGGTACCTGCGAGATGACAAAGGAAGAAACTGAAGTTGTTACTATTAGCGGGTACCATGACGTGCCACAGAACAATGAACAGAGCCTATTGAAGGCTCTTGCAAACCAACCCCTCAGTGTGGCCATAGATGCTTCAGGCAGAGATTTCCAATTCTATAGCGGGGGTGTTTTCGATGGACATTGCGGAAGTGACCTAGATCATGGTGTAGCAGCTGTTGGATACGGAAGTGCGAAAGGTGTGGACTATATCATAGTGAAGAATTCATGGGGTTCTAAGTGGGGAGAAAAAGGATACATCAGAATGAAGAGGAACATTGGAAAACCCGAGGGAATCTGTGGAATCTACAAGATGGCTTCTTATCCCACTAAGAACAAATAA 1044 0.4416 MAFSSKLLLLASFCLFASLSFGRDFSIVGYSSEDLKSMDKLIELFESWMARHSKIYETIEEKLLRFEIFKDNLKHIDERNKVVTNYWLGLTEFSDLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVTQVKNQGSCGSCWAFSTVVAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIDASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGSAKGVDYIIVKNSWGSKWGEKGYIRMKRNIGKPEGICGIYKMASYPTKNK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03799 347 SUPERFAMILY Cysteine proteinases 40 344 IPR038765 -
Viun9g03799 347 SMART pept_c1 129 344 IPR000668 GO:0006508|GO:0008234
Viun9g03799 347 FunFam cysteine protease XCP2 24 346 - -
Viun9g03799 347 Pfam Cathepsin propeptide inhibitor domain (I29) 45 101 IPR013201 -
Viun9g03799 347 Gene3D Cysteine proteinases 24 346 - -
Viun9g03799 347 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 147 158 IPR000169 -
Viun9g03799 347 PRINTS Papain cysteine protease (C1) family signature 147 162 IPR000668 GO:0006508|GO:0008234
Viun9g03799 347 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Viun9g03799 347 PRINTS Papain cysteine protease (C1) family signature 304 310 IPR000668 GO:0006508|GO:0008234
Viun9g03799 347 CDD Peptidase_C1A 130 343 IPR039417 -
Viun9g03799 347 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 304 323 IPR025661 -
Viun9g03799 347 SMART Inhibitor_I29_2 45 101 IPR013201 -
Viun9g03799 347 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 39 339 IPR013128 GO:0008234
Viun9g03799 347 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Viun9g03799 347 Pfam Papain family cysteine protease 129 344 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03799 Viun-Chr9 42756808 42758314 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03799 9 42756808 42758314 Viun9g03799 9 42756808 42758314 ECH
Viun8g00145 8 945410 947970 Viun9g03799 9 42756808 42758314 PCT