Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03702 ATGGTTACTACCACCGTTGATTCATCCTCTAATCACCACACACCTTCTGGTGCTGCCGATACCTATAGCTTCCCGCGAAAAAATCTGCCATCTCCGTGGGCCCAGGTCGTTCGCGGTGCCGACTCTGAACCTAACCATCAATCACCGCCTTCTTCTTCCTCTTCATCATCCCTCGATTCTGTTAATTCTATCGGTCCTGCTGCTGATACCGTTGATGCCGCCGTGAAACCTGTGTGGAAGAGGCCGTCTAATGACGCCGCGGAAATTGGGCCTGTAATGGGCGCAATATCTTGGCCCGCTTTATCCGAGTCCACCAAGCCCACTCCTAAATCGATATCTGATTCCGTCGATGATGAATCACTCACTCCTCCTAAGGGTCCTGTTGTTTCAGACTCTACTCAGAAACAAGCTTCTGATAATGTGAAACCTAGTCCTGCAATAAACCATGGTATGGGTAACAGACAGAGGTCAATGAAGCGTGGAGGGGCAAATGGCAATAATGTTGGCTATGGTCCTGTTCAGAACAACTTCTCGGGTGCTTCCCCTCATTTCCCTCCACCGCCACCCTTTCCCGTGCTTCAGATGCCTCCAAGTTCATTTGCACATGGAATACCTGGGGTTCCAGTTCCTTCTCCGAGAGAACCTTACAGGAACAAAAACTGGGATACGAGGCCTCCGATTGGAGGGTTTATGCCGCCAATGAACGAGAATCGGAGTCCCTCTCGCCGGGGAAATGCTGGGCATCATCCACGTGGAGATGTATCCTATCACAACAGTTATGGCAACAGGCGCGATCAGGATCGTGGAGGTTATGCAAATAACAGAGATACTCATGTAAATCATCAGAGGATGCCTCCAAGGGGATTAATGAGGCCTCCGCCGCCTAATCCTGCTTCATTCATGGGGCCTCAGCCCATGCGACCCTTTGCAAACCCTCCTGGGTTTCCTGAATTCTATTATTTCCCAACACTACAATTTGAACCCTTTGGGGGCATGCCGTTTTTAACACATGCACCTCCTCCTGCAATGTTCTTACCGGTTGCTGAAACCCCTCTCGCCAGTACAATAGTCAACCAAATTGATTATTACTTCAGTGATGCTAATTTAGTGAGGGATGAGTATTTAAGGTCCAACATGGATGAACAAGGATGGGTTCCAATTTCTTTGATTGCAAGCTTCCCTCGTGTTAGAAGTTTGACAAGCAACATTAAGTTGATACTGGAATCACTGAGAGCTTCCACTGTCGTCGAAGTGCAGGGTGACAAGTTGAGGAGGCGTAAAGAGTGGACCAAGTGA 1296 0.4892 MVTTTVDSSSNHHTPSGAADTYSFPRKNLPSPWAQVVRGADSEPNHQSPPSSSSSSSLDSVNSIGPAADTVDAAVKPVWKRPSNDAAEIGPVMGAISWPALSESTKPTPKSISDSVDDESLTPPKGPVVSDSTQKQASDNVKPSPAINHGMGNRQRSMKRGGANGNNVGYGPVQNNFSGASPHFPPPPPFPVLQMPPSSFAHGIPGVPVPSPREPYRNKNWDTRPPIGGFMPPMNENRSPSRRGNAGHHPRGDVSYHNSYGNRRDQDRGGYANNRDTHVNHQRMPPRGLMRPPPPNPASFMGPQPMRPFANPPGFPEFYYFPTLQFEPFGGMPFLTHAPPPAMFLPVAETPLASTIVNQIDYYFSDANLVRDEYLRSNMDEQGWVPISLIASFPRVRSLTSNIKLILESLRASTVVEVQGDKLRRRKEWTK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03702 431 MobiDBLite consensus disorder prediction 1 69 - -
Viun9g03702 431 SMART la 350 428 IPR006630 -
Viun9g03702 431 MobiDBLite consensus disorder prediction 258 274 - -
Viun9g03702 431 PANTHER LUPUS LA PROTEIN-RELATED 95 431 IPR045180 -
Viun9g03702 431 ProSiteProfiles La-type HTH domain profile. 346 431 IPR006630 -
Viun9g03702 431 MobiDBLite consensus disorder prediction 41 64 - -
Viun9g03702 431 Gene3D - 346 431 IPR036388 -
Viun9g03702 431 MobiDBLite consensus disorder prediction 100 169 - -
Viun9g03702 431 MobiDBLite consensus disorder prediction 126 143 - -
Viun9g03702 431 Pfam La domain 356 411 IPR006630 -
Viun9g03702 431 SUPERFAMILY "Winged helix" DNA-binding domain 344 429 IPR036390 -
Viun9g03702 431 MobiDBLite consensus disorder prediction 208 288 - -
Viun9g03702 431 CDD LAM 356 427 - -
Viun9g03702 431 FunFam la-related protein 1B isoform X2 342 431 - -
Viun9g03702 431 MobiDBLite consensus disorder prediction 1 18 - -
Viun9g03702 431 MobiDBLite consensus disorder prediction 101 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03702 Viun-Chr9 42207100 42211553 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03702 9 42207100 42211553 Viun9g03702 9 42207100 42211553 ECH
Viun8g00074 8 351902 356394 Viun9g03702 9 42207100 42211553 PCT