Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03644 ATGCTCTACTGCACTGCACCATATCTCACCCCACAACTTTATCACTCTTCCCTATTCTCCAAGCCGCCAAACCCACCAATGATCCCTTCACTCTCACTCCACATTATTCCTCTTCTCATTCTTCAGCTCCTCGTCCTAGCACCGCCGTCGCCGGCGGAAGCCGGCAAGGGACAGTGGCAGCTCCTCCAAGAAAACATCGGCATTGTCGGCATGCACATGCAGCTCCTCCACAACGACCGCGTCATCATACTAGACCGCACTGACTTTGGATTCTCCAACCTAACCCTCCCCGACGGAAGATGCCGCAAAAATCCAAATGAGATGGTCGTCAAAACCGACTGCACCGCACACTCCATCGAATACGACGTCGCAGCCAACACAGTACGCGCCCTCTTCGTCCAAACCAACGTCTGGTGCTCCTCCGGTTCGGTTTTTCCCGACGGAACACTAGTCCAAACCGGAGGCTTCAACGACGGAGACCGCACAGTCAGAACCTTCACCCCATGCCGCACGTGCGACTGGCGCGAAGTTAACAGTGGACTCTCAGCACGAAGATGGTACGCCACCAATCACATCTTGCCAGATGGACGACAGATAATAATCGGCGGGAGAAGACAATTCAACTACGAGTTTTACCCCAAGACACAAACCACGGCCAAGAACACTTACAGTTTACCTTTTCTCGTTCAAACAAACGACGCCTCCGAGGAAAATAATCTCTACCCCTTTGTTTTCTTAAACGTCGATGGCAACCTTTTCATCTTCGCAAACAACCGCGCTATCTTGTTCGATTATAATAAGAACCGTGTCGTCAAAACCTACCCTCAAATACCCGGTGGAGACCCACGGTGCTATCCCAGTACCGGTTCTGCGGTTTTGCTTCCGTTGAAGAATCTTCGAGAATCCAATGTGGAAGCCGAGGTTTTAATTTGCGGTGGAGCCCCGAGAGGGGCTTATCCGGATACCCTCTCGGGTCGGTTTACCGGAGCGTTGAAAACGTGTGCTAGGATTAAAATAACCGACCCGAACCCGAGTTGGGTGATGGAAACCATGCCAGGTGCGAGAGTCATGAGTGACATGGTTTTACTCCCAAACGGCGACGTTTTAATTATTAATGGAGCTTCACAAGGGACTGCGGGCTGGGAAATGGGTCGGGACCCGGTATTGGATCCATTTCTTTATAAACCGAATAATCCGATCGGGTCGAGATTTGAGATCCAAAACCCGTCAAATATTCCGCGAATGTACCACGCCAGTGCCATTGTGCTTCGTGATGGTCGCGTTCTTGTGTCTGGGAGCAATCCTCACACGTACTACAACTTCACCAACGTAATGTTCCCAACGGAGTTACGGTTGGAAGCGTTTTCTCCTCCTTATCTTGAGCCCGAACTCTCTAACCTGCGTCCCACGATAGTGTCCCCTTCGTCCCAAACAGTAGTAAAGTACGGGGAGACATTGAAGGTTGGATTTGAGGTGACCGCGAGTTTGTTTAAGGATTCGGTGTCGGTTACGATGTTGGCGCCGCCTTTTACAACGCACTCCTTCTCCATGAATCAGAGGCTATTGGTTCTGGAGGCGCAAGATTTGAGCGAGGTTGGGAAATTGTCTTACGAAGTGGAAGTTACGGCCCCGGGTTCCAGTGTTCTTGCACCACCGGGTTTCTATCTGTTATTTGTGGTCCATCGAGAAATTCCAAGCCACGGTATATGGGTTCGGATGGTGTGA 1725 0.5101 MLYCTAPYLTPQLYHSSLFSKPPNPPMIPSLSLHIIPLLILQLLVLAPPSPAEAGKGQWQLLQENIGIVGMHMQLLHNDRVIILDRTDFGFSNLTLPDGRCRKNPNEMVVKTDCTAHSIEYDVAANTVRALFVQTNVWCSSGSVFPDGTLVQTGGFNDGDRTVRTFTPCRTCDWREVNSGLSARRWYATNHILPDGRQIIIGGRRQFNYEFYPKTQTTAKNTYSLPFLVQTNDASEENNLYPFVFLNVDGNLFIFANNRAILFDYNKNRVVKTYPQIPGGDPRCYPSTGSAVLLPLKNLRESNVEAEVLICGGAPRGAYPDTLSGRFTGALKTCARIKITDPNPSWVMETMPGARVMSDMVLLPNGDVLIINGASQGTAGWEMGRDPVLDPFLYKPNNPIGSRFEIQNPSNIPRMYHASAIVLRDGRVLVSGSNPHTYYNFTNVMFPTELRLEAFSPPYLEPELSNLRPTIVSPSSQTVVKYGETLKVGFEVTASLFKDSVSVTMLAPPFTTHSFSMNQRLLVLEAQDLSEVGKLSYEVEVTAPGSSVLAPPGFYLLFVVHREIPSHGIWVRMV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03644 574 CDD E_set_GO_C 465 573 IPR015202 -
Viun9g03644 574 SUPERFAMILY E set domains 465 573 IPR014756 -
Viun9g03644 574 SUPERFAMILY Galactose oxidase, central domain 118 461 IPR011043 -
Viun9g03644 574 Pfam Glyoxal oxidase N-terminus 71 313 IPR009880 -
Viun9g03644 574 Gene3D Immunoglobulins 467 574 IPR013783 -
Viun9g03644 574 FunFam Aldehyde oxidase GLOX 53 466 - -
Viun9g03644 574 Pfam Galactose oxidase-like, Early set domain 468 572 IPR015202 -
Viun9g03644 574 PANTHER SECRETED PROTEIN-RELATED 43 573 - -
Viun9g03644 574 Gene3D - 53 464 IPR037293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03644 Viun-Chr9 41855576 41857731 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00136 8 873565 875621 Viun9g03644 9 41855576 41857731 PCT