Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03618 ATGGCCGCCGAAGAGGGACAAGTTATCGGTGTTCACAGCGTCAGTGCGTGGGAAGAACATCTCAAAAAGGGACAAGAGTCCAAAAAGCTGATTGTGGTGGATTTCACCGCTTCTTGGTGCGGTCCATGCCGATTCATTGCTCCAATCCTAGCTGAGATTGCTAAAAAGCTGCCCCATGTCACCTTTCTCAAGGTGGATGTAGATGAACTGGAGTCTGTTTCACAAGAGTGGAAGGTTGAAGCTATGCCAACCTTCCTGTTCTTGAAAGAGGGCAAGGTGGTGGACAAGGTTGTGGGAGCCAAGAAAGATGAGCTGCAACAGGCAATAGTCAAGCATTCAGAGCCTGCTGCTGCTGCTAGTTCCATATGA 369 0.4932 MAAEEGQVIGVHSVSAWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELESVSQEWKVEAMPTFLFLKEGKVVDKVVGAKKDELQQAIVKHSEPAAAASSI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03618 122 NCBIfam thioredoxin 24 111 IPR005746 GO:0015035
Viun9g03618 122 Gene3D Glutaredoxin 1 119 - -
Viun9g03618 122 CDD TRX_family 19 109 - -
Viun9g03618 122 SUPERFAMILY Thioredoxin-like 5 114 IPR036249 -
Viun9g03618 122 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Viun9g03618 122 Pfam Thioredoxin 12 109 IPR013766 -
Viun9g03618 122 PANTHER THIOREDOXIN 8 110 - -
Viun9g03618 122 PRINTS Thioredoxin family signature 31 39 - -
Viun9g03618 122 PRINTS Thioredoxin family signature 78 89 - -
Viun9g03618 122 PRINTS Thioredoxin family signature 39 48 - -
Viun9g03618 122 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Viun9g03618 122 FunFam Thioredoxin 7 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03618 Viun-Chr9 41654324 41655663 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03618 9 41654324 41655663 Viun9g03618 9 41654324 41655663 ECH
Viun8g00157 8 1004752 1006000 Viun9g03618 9 41654324 41655663 PCT