Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03617 ATGGAAACCATTACCATTACCAATTCAGTTTCCAAGTTACTGCCTTTGTTTTTCACGCTCTTGTTTGTGGGTTCTCAGCTCATACATTGCAATGTCACCTATGATAGAAAGTCTCTTCTCATCAATGGCCAGAGGAGAATCCTCATTTCTGGCTCCATTCACTATCCCAGAAGCACCCCCGAGATGTGGGAGGATCTAATTAGGAAGGCCAAACATGGAGGCCTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCATGAACCATCACCTGGCAATTATAATTTTGAAGGAAGGTATGATCTAGTACGGTTTATTAAGACGGTGCAGAAGGTGGGGCTTTATGCCAACCTTCGAATTGGACCTTACGTGTGCGCTGAGTGGAACTTTGGAGGAATTCCTGTATGGTTGAAGTATGTTCCCGGTGTGAGCTTTAGAACGGATAATGAGCCTTTCAAGGCAGCAATGCAAGGTTTCACGCAGAAAATTGTCCAGATGATGAAGAGTGAGAAGTTGTTCCAGTCTCAGGGTGGTCCAATAATTCTCTCTCAGATTGAGAATGAGTACGGACCAGAGAGCAGAGCAATGGGAGCTGCTGGTCGTGCGTACTTAAACTGGGCTGCAAGCATGGCTGTTGGATTGGGCACAGGAGTGCCCTGGGTGATGTGCAAGCAAAATGATGCCCCAGATCCTGTGATCAATTCATGTAATGGTTTTTACTGTGATGATTTCACTCCAAATAAACCATACAAGCCTACCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGCCCAATTCACCAGCGACCAGTTCAGGATCTATCATTTGCAGTTGCTCGTTTCATTCAAAAGGGTGGCTCGTATGTGAATTATTACATGTATCATGGAGGAACAAACTTTGGACGATCAGCTGGAGGCCCATTCATTACTACAAGCTATGACTATGACGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGGAGCTTCATAGAGCTATTAAGCGGTGTGAACATGCTTTGGTTTCTTCGGATCCCACAGTTGCGTCGTTAGGAAATCTACAGCAGGCTCATGTATACTCTTCAGGTACTGGAACATGTGCAGCTTTTCTAGCAAACTACAATGCAAACTCTGCTGCTACGGTGACGTTCAATAACAGGAACTATGATTTGCCTCCTTGGTCCATAAGCATCCTTCCTGATTGCAAAACTGATGCATTTAATACTGCAAAAGTGAGAGTTCAAACTTCACAGGTAAAAATGGTTCCTGTCAGTACTAAGTTGTTCTCATGGGAGAGCTATGATGAAGATCTATCTTCTCTGGCTGAGAGTTCAAGGATTACATCTCCTGGACTATTAGAACAACTCAACGTTACCAGGGACACCAGTGACTACCTATGGTACATAACCAGCGTTGACATAAGTTCATCAGAAACCTTTCTTCGAGATGGAAAAAAACCCAGCATTAATGTGCAGTCTGCTGGAGACGCTGTTCATGTGTTCGTTAATGGGCAATTTTCAGGGTCAGCTTTTGGGACAAGGGAGCAGAGAAGTTGTACATTTAATGGAGCCATAGATCTCCACGCTGGAACAAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTACCTAATGTTGGTCGGCATTATGAAACATGGGAGACAGGGATCACTGGTCCAGTCTTGCTACATGGTCTCGACCAGGGACACAAAGATTTAACATGGAATAAGTGGTCGTACAAGGTTGGCCTAAGAGGAGAAGATATGGATTTGGCGTCTCCCAATGGGGTATCGTCTGTTGATTGGGTTCAAGAATCACAGGGTACACAAAGTCGGTCGCAATTGAAATGGTACAAGGCTTATTTTGATGCACCTGGTGGAAAGGAACCACTGGCTTTGGACCTAGAAAGCATGGGTAAGGGTCAGGTATGGATCAACAGACAGAGCATAGGGAGATATTGGTTGGCCTATGCAAAGGGTGATTGTAATTCTTGCTCCTATTCTGGAGGCTTTCGTCCTGTAAAATGCCAACTTGGTTGTGGCCAACCCACTCAACGATGGTATCACGTTCCGAGGTCCTGGCTAAAGCCAACGAAGAACTTGATCGTAGTGTTGGAAGAATTAGGCGGAAATCCTTGGAAAATATCTTTGGTGAAGAGAATGGTACATACTCCGGCAGGTCATGGGCAGTGA 2223 0.4462 METITITNSVSKLLPLFFTLLFVGSQLIHCNVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGVSFRTDNEPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRAMGAAGRAYLNWAASMAVGLGTGVPWVMCKQNDAPDPVINSCNGFYCDDFTPNKPYKPTMWTESWSGWFTDFGGPIHQRPVQDLSFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHRAIKRCEHALVSSDPTVASLGNLQQAHVYSSGTGTCAAFLANYNANSAATVTFNNRNYDLPPWSISILPDCKTDAFNTAKVRVQTSQVKMVPVSTKLFSWESYDEDLSSLAESSRITSPGLLEQLNVTRDTSDYLWYITSVDISSSETFLRDGKKPSINVQSAGDAVHVFVNGQFSGSAFGTREQRSCTFNGAIDLHAGTNKIALLSVTVGLPNVGRHYETWETGITGPVLLHGLDQGHKDLTWNKWSYKVGLRGEDMDLASPNGVSSVDWVQESQGTQSRSQLKWYKAYFDAPGGKEPLALDLESMGKGQVWINRQSIGRYWLAYAKGDCNSCSYSGGFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVLEELGGNPWKISLVKRMVHTPAGHGQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03617 740 FunFam Beta-galactosidase 296 424 - -
Viun9g03617 740 SUPERFAMILY Galactose-binding domain-like 585 734 IPR008979 -
Viun9g03617 740 Pfam Glycosyl hydrolases family 35 38 343 IPR031330 -
Viun9g03617 740 FunFam Beta-galactosidase 27 347 - -
Viun9g03617 740 Gene3D Glycosidases 25 347 - -
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 650 666 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 PRINTS Glycosyl hydrolase family 35 signature 623 637 IPR001944 GO:0004553|GO:0005975
Viun9g03617 740 Gene3D - 605 735 - -
Viun9g03617 740 SUPERFAMILY (Trans)glycosidases 31 347 IPR017853 -
Viun9g03617 740 Gene3D - 442 590 - -
Viun9g03617 740 FunFam Beta-galactosidase 450 587 - -
Viun9g03617 740 SUPERFAMILY Galactose-binding domain-like 406 577 IPR008979 -
Viun9g03617 740 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Viun9g03617 740 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Viun9g03617 740 FunFam Beta-galactosidase 595 736 - -
Viun9g03617 740 PANTHER BETA-GALACTOSIDASE RELATED 25 733 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03617 Viun-Chr9 41645531 41650617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03617 9 41645531 41650617 Viun9g03617 9 41645531 41650617 ECH
Viun8g00158 8 1006248 1011788 Viun9g03617 9 41645531 41650617 PCT