Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03600 ATGGCGGTGCTGCGTGGGTTGCTTCTGGTTTTCTTTGTTGTGTGTGTTAGCGTGGAGCAGAGTAAGGTGCTCCATGTAGAAGCAGATGATGGTGGTGGTGGGTTTGTGAAAACAAGAGGAGTGCAACTTATACTGAACGGAAGCCCCTTCTATGCTAATGGCTTCAATGCTTATTGGCTTATGTACATTGCCTCTGATCCTTCTCAGAGAAACAAAGTCTCTTCAGCCTTTCAACAGGCTTCAAATCATGGACTCAACATGGCCAGAACTTGGGCTTTCAGTGATGGTGGCTACAAGCCCTTGCAATACTCTCCTGGATCCTACGATGAACAAGTTTTCCAGGGATTGGATTTCGCAATAGCGGAAGCAAGAAAATACGGGATCAAGCTGGTTCTGAGTTTGGTGAACAACTATGAGAACATGGGTGGCAAGAAACAGTACGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAAGATGATTTTTTCACAAATCCTGTGGCCAAGGGATTCTACAAAAACCACATCAAGGCTGTACTTACAAGACGTAATAGCATCACTGGAATTGCATACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAAAACAGTTCAGGGTTGGATTTCTGAGATGGCATCTTACCTGAAATCCATTGATGGAAACCACTTGCTGGAAGCTGGTTTGGAGGGTTTCTACGGCCAGTCAAAGACTCAGTCCAATCCAAACTTCAATGTTGGAACCGATTTCATTGCAAACAACCAAATCCCCGGCATTGATTTCGCAACAGTGCACTCCTACCCAGACCAATGGCTATCGAGTTCAGGTTATGAAGAGCAAATCTCATTCTTAGAGCGGTGGGTGGATGAGCACATCCAAGATGCGCAGAACACTCTTCACAAGCCAGTTATCTTTGCGGAGTTCGGCATTTCCACAAAGAGCTTCGGTGGCAACTCAGCGCCAAGGGATCGGTTATTCAACACGGTTTATTCAGCAATATACTCATCCGCGAGTAGTGGTGGTGCTGCTGTTGGTGGCTTGTTTTGGCAGCTTCTAGCTCAAGGAATGGATTCTTTTCGAGATGGTTACGAGGTTGTCTTAGATGAAAGCCCCTCAACGGCTACTTTGATCGCTCAACAGTCTCAAAAACTAAACCACATTCGCAAGATGTACGCCAGACTCAGAAACATTGAGAAGTGGAACAGAGCTAAGGAAATCAGAGGCTCCCAATGGCATGTTGGTGCTAACGGTGGAAACTAA 1302 0.457 MAVLRGLLLVFFVVCVSVEQSKVLHVEADDGGGGFVKTRGVQLILNGSPFYANGFNAYWLMYIASDPSQRNKVSSAFQQASNHGLNMARTWAFSDGGYKPLQYSPGSYDEQVFQGLDFAIAEARKYGIKLVLSLVNNYENMGGKKQYVEWARSQGQSINSEDDFFTNPVAKGFYKNHIKAVLTRRNSITGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQGWISEMASYLKSIDGNHLLEAGLEGFYGQSKTQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSGYEEQISFLERWVDEHIQDAQNTLHKPVIFAEFGISTKSFGGNSAPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLAQGMDSFRDGYEVVLDESPSTATLIAQQSQKLNHIRKMYARLRNIEKWNRAKEIRGSQWHVGANGGN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03600 433 PANTHER - 8 421 IPR045053 GO:0004553
Viun9g03600 433 FunFam Mannan endo-1,4-beta-mannosidase 6 32 402 - -
Viun9g03600 433 SUPERFAMILY (Trans)glycosidases 35 390 IPR017853 -
Viun9g03600 433 Pfam Cellulase (glycosyl hydrolase family 5) 46 328 IPR001547 GO:0004553|GO:0071704
Viun9g03600 433 Gene3D Glycosidases 33 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03600 Viun-Chr9 41534025 41536977 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03600 9 41534025 41536977 Viun9g03600 9 41534025 41536977 ECH
Viun8g00187 8 1163067 1166867 Viun9g03600 9 41534025 41536977 PCT