Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03583 ATGGCCTCAAGCCAGGGTTGGACACCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGATAGGTGGCACAACCTGGCCAGAGCCGTCGGAGGAAAAACTGTGGAAGACGTCAAAAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGCAGATCGAGGAAGGCCACGTGCCCCTTCCCAATTACCGAAGCGTTGCAACCATGGCAAGCAGCATCAGAGGTTACGGTTACATGGATGAACAAAACAGGATGAAGGGTCTGAGTCTGCATTGA 294 0.5136 MASSQGWTPKQNKRFENALAIFDKDTPDRWHNLARAVGGKTVEDVKRHYEKLVEDVKQIEEGHVPLPNYRSVATMASSIRGYGYMDEQNRMKGLSLH 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03583 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 77 IPR044636 GO:0003700
Viun9g03583 97 FunFam Transcription factor SRM1 1 66 - -
Viun9g03583 97 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Viun9g03583 97 SMART sant 3 55 IPR001005 -
Viun9g03583 97 CDD SANT 7 53 IPR001005 -
Viun9g03583 97 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Viun9g03583 97 Gene3D - 1 66 - -
Viun9g03583 97 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03583 Viun-Chr9 41452953 41454145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g03583 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03583 9 41452953 41454145 Viun9g03583 9 41452953 41454145 ECH
Viun8g00206 8 1300917 1301987 Viun9g03583 9 41452953 41454145 PCT