Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03545 ATGGCGAAATCGAGCGCCGACGATGCCGAGCTTCGGCGAGCATGCCAGCTCGCGGTTGAGGGCACCAAGCAAAAGGTCATTCTATGCATTCGGACCGTCAAGACCCACGGCACGTGGGGAAAATCTACTAAGATTCGTCAAATGGCTAAGCCTAGGGTTCTCGCTCTATGCACAAAAGCGAAAGGTCAGCGGACAAAAGCTTTTCTTCGAGTTTTAAAGTATTTAAGTGGAGGGGTGCTTGAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAATGGAAGTTGTAACAAATGACCCCAGTGGATGTACATTTACACTGGGGTTTGATAACCTTAGAAACCAGAGCGTGGCTCCTTCACAGTGGACAATGCGCAATACGGATGACAGAAATCGCCTCCTGCTTTGTATCTTAAATATCTGCAAAGATGTCCTGGGTCGCTTACCGAAGGTTGTTGGTATCGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCGCTCAAAGTAACGAACACGGTGGTGCTTCTATTGCATCTTCTGTGAATGAATCAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATAGAGGCTCTTCTGGGAACTTATATCATGGGTGTTGGTGAAGCAGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTCATGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATAGATGAGGTGTTGCACGGGCTTGAGTCAGCAACAAATTGTCTGGAAGACATGAATGAATGGTTAGGCATGTTCAACGTAAAACTTCGTCACATGAGGGAAGATATTGAATCAATTGAAACCCGCAATAACAAATTGGAAATGCAAAATGTAAATAACAAATCTCTTATTGAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTGCAGAGTATTCAGCATGTTTGACAGGAGATTCATTTGATGAAGCAGAAATGCAGCAAAACATAGAAGCATGTGAGTGGTTGACAACTGCCATGCGTGGTCTAGAAAAGCACATAGATCCTACTTATGTAAAAATGAGAGGAGTTAAAGAGAAGCGAGGAGAACTTCAAATAATAAAGTCTACTTTTGTTGGGAAAGCTTCTGAGTACATGAGAAATTACTTCGCTACTTTTGTGGACTTTATGTTGAATGATAAAAATTACTTCTCTCAGCGAGGGCAGTTGAAAAGGCCAGATCATGCTGACTTGAGGTTCAAGTGCAGGACATATGCACGCCTTCTTAAACATTTAAAGATTCTTGATAAGAATTGTTTGGGTCCACTGAGAAAAGCCTATTGCAGTTCTCTAAACTTGCTTCTTCGCAAGGAGGCCCGGGAATTTGCTAATGAACTTCGTGCTGGTGTGAAAACTTCTAAAACCCCCTCTGTTTGGCTTGATGTCTTCACGGGTTCTGGTCAAAATGTAAATGCTGCTGACACTGCAACAGTTTCTGATGCATATGCAAAGATGCTCACGATTTTTATCCCACTCTTGGTGGATGAGAGCGTGTTTTTTGCACACTTCCTGTGCTTTGAAGTTCCTTCAACTGTTAATGGTAATAAAACTACACACAACAATGAGGATGATGATGGTGTTGCATCTGGTAGAATGGCTGTGGATCTTGCATCTTTAAATGAAGCACTTCAGGATTTGCTTGATGGACTTCAAACTTCGGTTCTGTTGTGGATTGGGCATACAAGATTGATCCTTTGTGCTGCATATCAATGCATGGAACTACAGAGCGCTATCTCTCAGGTCAGAAAGGTGACGCAGCAGGATATGTACGCGTTTTGCTTGATGACTTGGAGGCTCGCATATCCTTTCAGTTCGGTCGATTTGTGGACGATGCTTCCCATCAAATTGAAAGAAATGAGCGCAATGCTCGCCAAACAGGTGTCCTACCATACATTCCTAGGAGTTCAAGAAGTAACATATGGAGGTGCAGGAAGAAACTGTCCAAAATCTTACGTAGTTTTGTCCAACTTATCTGTATATGGCGGCCCAATGACAAAGTTGCTGAAAGCAGGCACATCAGCTTTATTAGGGGTCGTCATGGGTTAG 2121 0.4319 MAKSSADDAELRRACQLAVEGTKQKVILCIRTVKTHGTWGKSTKIRQMAKPRVLALCTKAKGQRTKAFLRVLKYLSGGVLEPAKLYKLKHLSKMEVVTNDPSGCTFTLGFDNLRNQSVAPSQWTMRNTDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVSAQSNEHGGASIASSVNESELKVYVEKELVSQAEEEDIEALLGTYIMGVGEAEAFSERLKRELMALEAANVHAILESEPLIDEVLHGLESATNCLEDMNEWLGMFNVKLRHMREDIESIETRNNKLEMQNVNNKSLIEELDKLLEQLSIPAEYSACLTGDSFDEAEMQQNIEACEWLTTAMRGLEKHIDPTYVKMRGVKEKRGELQIIKSTFVGKASEYMRNYFATFVDFMLNDKNYFSQRGQLKRPDHADLRFKCRTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRKEAREFANELRAGVKTSKTPSVWLDVFTGSGQNVNAADTATVSDAYAKMLTIFIPLLVDESVFFAHFLCFEVPSTVNGNKTTHNNEDDDGVASGRMAVDLASLNEALQDLLDGLQTSVLLWIGHTRLILCAAYQCMELQSAISQVRKVTQQDMYAFCLMTWRLAYPFSSVDLWTMLPIKLKEMSAMLAKQVSYHTFLGVQEVTYGGAGRNCPKSYVVLSNLSVYGGPMTKLLKAGTSALLGVVMG 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03545 706 Coils Coil 280 317 - -
Viun9g03545 706 PANTHER SEC3/SYNTAXIN-RELATED 58 583 - -
Viun9g03545 706 SMART Sec3_PIP2_bind_2 47 145 IPR028258 -
Viun9g03545 706 Pfam Exocyst complex component Sec3 223 490 IPR019160 GO:0000145|GO:0006887
Viun9g03545 706 Coils Coil 227 247 - -
Viun9g03545 706 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 48 143 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03545 Viun-Chr9 41226890 41239481 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03545 9 41226890 41239481 Viun9g03545 9 41226890 41239481 ECH
Viun8g00259 8 1638777 1654676 Viun9g03545 9 41226890 41239481 PCT