Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03532 ATGCACTTGTACGTCATGAGCTCGTACTCAAAACCACTTTTAAATTGGAACAACGGTACACCAATCTCTACAATCCCTATGTGCACCACTCCGCACGCAGTAATGAGAACCTTTGCACCCTTGCCAGAGCCAGACCTCTCCTTAAACATCAGCCCTCCATTCACTTCAGATCCTGACGCTAAACAAGTGGAGGCAACCTGCAACGGATTAACATTAACCACCAAAACGCTTTACAGCGATCTGTGCTCAACCTCTGATTCTGGTAGCAGTGGAAGCGATTTAAGCCACGAACATGGTTTTCGCCACGCTGTCTACAACCTTGGTCATCGTGAACCGACATTGAGCTTAGGCTCCGGAAGGGAAAATTTGAATTTTTATCCTATCCAAGGAGCAGTGTCGAGAAACTTCAATCACCTCCACAACTACCAACCTCAGACTAATACCGTTGATTTCAAACGAAATGCTAGAGGCATTCAAGGTGTGAGAAGAAGCTCAAGAGCTCCTAGAATGCGATGGACAACGACCCTCCACGCTCACTTTGTTCATGTGGTTCAGCTTCTTGGTGGGCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTGAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCTCTGACAAAAGCAGCGCAGGTTATGGGCAGACAGGTATAGGGTTGAGCCAAAAGCCAGGGATTGTCGATCTGCATGGAGCCGTAGCTTGTGAGAGACCAAATTTGCCACACCCGCTGCTAAAATCCCACAGGGCGCCATGGCAATCATCGATGGAGACAAATTCAATAAATTACATACAGAGCCCCATTATCAATTCAATGTATCCTCATGCGAGAGAAAACCAAACCATGGTGGGTGGACAGCATTATGGAGGCCTGTCGAATTGCATGGAGGAGAAATTGGAATCTTGCTCTTTGTCACGTTCCGATATGACGCTAGACCTAGAATTTACCCTTGGAAGGCCCACTACTTGCAAAGAGATCACGCAGAAACAACAGAATTAA 1056 0.465 MHLYVMSSYSKPLLNWNNGTPISTIPMCTTPHAVMRTFAPLPEPDLSLNISPPFTSDPDAKQVEATCNGLTLTTKTLYSDLCSTSDSGSSGSDLSHEHGFRHAVYNLGHREPTLSLGSGRENLNFYPIQGAVSRNFNHLHNYQPQTNTVDFKRNARGIQGVRRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQTGIGLSQKPGIVDLHGAVACERPNLPHPLLKSHRAPWQSSMETNSINYIQSPIINSMYPHARENQTMVGGQHYGGLSNCMEEKLESCSLSRSDMTLDLEFTLGRPTTCKEITQKQQN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03532 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 168 221 IPR006447 GO:0003677
Viun9g03532 351 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 44 341 IPR044847 GO:0000976|GO:0006355|GO:0010158
Viun9g03532 351 FunFam Myb family transcription factor 166 224 - -
Viun9g03532 351 Pfam Myb-like DNA-binding domain 169 220 IPR001005 -
Viun9g03532 351 Gene3D - 167 224 - -
Viun9g03532 351 SUPERFAMILY Homeodomain-like 165 222 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03532 Viun-Chr9 41130924 41135566 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun9g03532 Myb_DNA-binding 2.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03532 9 41130924 41135566 Viun9g03532 9 41130924 41135566 ECH
Viun8g00264 8 1699452 1703753 Viun9g03532 9 41130924 41135566 PCT