Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03444 ATGAGGCAGTGGATTCACGTGGCGGTGGCCGCAGCCGCCGTGGGATGCGTCTCCACCCTTTTGTTGGTCTTTCTCTTCCGTTGGTGTCGGAAAAGAAATGGCACGAATTTTGTTGAACCGGCTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATTTCTGTTTCCAGGATCCATCAGCAACCTTTTCAGGTGGATCAGGGGAGCAAGAACAGCAACAAGGGTAATTACAATTACTATGTTTTTCGCGGCGGTGGGGTGTCGGGGAAAAGAAGCTTCTTCAATTGGGGTGATCATCCATCCATGGCCTCTGATGCTGTTGAAAATGGATGGTCACGATTTGCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGGGGCTTTTGGGGGCGTGTGCTGCACCGGCAGGGAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGGCACGTGGATCTGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCTGGTATTAAAAAATCTCATCAAAGCAACAATAGTAATGGTTCTCTGGGCGTTGCTTCTATCATTAGAGGGGCTTTGCCTTTGCCTGGGCCTCCCCTGGGGAATTGCGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGCGATGATAGTGAATCTGTTGGGAAGAGTGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAAGGAAACTCCAATGGCAAAGGGAATTCCGAGGCTTTGGTTCATGTTACCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGAGAGAGTGGGAAGGGTGAATCTGTGATGTTCTCCTTGGGTTTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTATCCTGGGAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAACGAAACTTGTACGCGAATCGGAGAAGGCAGAGTGGGTGGGAACTGATAAAGTGATTGGTTGTGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACTATAGACTCTGATCTAATGCATGTAATTCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCGATCATGGCTGCAAATATAGACATTATGGTGTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCGAATGCCCAGAGAACGCCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCAGCTACCTTGGGCTACGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCTCAGTGGCTCAACCGGTCCACAACCAAAGGAAGCCACAATAATAATAATAACAACCATAACAATAATCGAACATTGGATTTTGACGAGGAGTCTGAGGCTGATCTGTTTGAAATCGTCATAGATGGTTCTGGAAAATATCCCAACACAGCATCATAG 1455 0.4715 MRQWIHVAVAAAAVGCVSTLLLVFLFRWCRKRNGTNFVEPASLTRVESVQGGISVSRIHQQPFQVDQGSKNSNKGNYNYYVFRGGGVSGKRSFFNWGDHPSMASDAVENGWSRFAFTGYKSYTPSPSKRSGLLGACAAPAGSDFGRESEAEISWEVARGSAEFMQKVRLNPGIKKSHQSNNSNGSLGVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDDSESVGKSGEGEKTKLLVQGNSNGKGNSEALVHVTSGNGSNKINNVEGESGKGESVMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSLYLDGTKLVRESEKAEWVGTDKVIGCGFDPRQKKVFFTIDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNNHNNNRTLDFDEESEADLFEIVIDGSGKYPNTAS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03444 484 SUPERFAMILY Concanavalin A-like lectins/glucanases 295 392 IPR013320 -
Viun9g03444 484 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Viun9g03444 484 MobiDBLite consensus disorder prediction 438 455 - -
Viun9g03444 484 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 87 472 IPR043364 GO:0098609
Viun9g03444 484 Pfam SPRY domain 213 387 IPR003877 GO:0005515
Viun9g03444 484 Gene3D - 202 400 IPR043136 -
Viun9g03444 484 MobiDBLite consensus disorder prediction 438 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03444 Viun-Chr9 40669136 40671998 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03444 9 40669136 40671998 Viun9g03444 9 40669136 40671998 ECH
Viun8g00363 8 2356320 2359116 Viun9g03444 9 40669136 40671998 PCT