Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03435 ATGGCTAATCACCACCACCATCATCATGCGCACGACACCAACCTCAAATCCCTTCTCGACACCCTATACTGCTCCGAAGAGCATTGGGAGGAAGATGTTGGGGAAGATGAATTAGACGAAGCAGAGAATAATAATACTACTAATAATAACGCTACCAGTAGCAGAAGCACCCTAATAAACTCCCTTCACTACCCTCATGTGTTGTTCGAAAGCGACATGTTTTGTGACGAACAGGAGTTGACATCGCTGCTGGGGAAAGAACAACACAACCCTCTAACCACTTGCCTCCAAACCAACCCTGCGCTCCAGTGTGCTCACAGAGAAGCCGTGGAGTGGATGCTCAGAGTGAACGCTCACTACTCCTTCTCTGCTCTCACATCCCTTCTTGCCGTCAACTACTTTGACCGCTTCCTCTCCACCATCCACTTTCAGGATGCCAAGCCATGGATGACACATCTCGCCGCCGTCGCTTGTCTCTCCCTCGCTGCCAAAGTGGAGGAGACACAAGTCCCCCTTCTCCTAGACCTTCAGGTGGAAGAGGGTAGATACTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTCCTTTCCACCCTTGGATGGAAGATGAACCCGCCAACCCCTCTCTCCTTTCTTGATTACATCACAAGAAGACTTGGATTGAAGGATCATCACTGCTGGGACTTCCTCAGGAAGTGCGAAGGCGTTCTTGTTTCTGTCCTCGGAGATTGGAGGTTAATGGGTTATCTACCGTCTGAATTGGCAAGTGCTACGATGATACACGTTGTGAAAAGCGTGGAGCCTTGTCTAGAAGGCGAATACCAGAGACAACTCTTGGGTATTCTGGGATTCGACAAGGAGAAGGTGAACGAGTGTGGGAAGGTGTTGGAATTGTGGTCAGGGTACGAGAAGCAGGGGAAGCAATGCATGAAACGAAAGCTTGGAAGCGTTCCGGGAAGTCCAAACGGCGTGATGGAAATGTCGTTTAGCTGTGATAGCTCGAACGAGGCGTGGGGAGTAGCTGCTGCTGCTGCTGCTGCTTCTGCTTCTGGTTCAGTGTGTTGTTCGGCGGAAGGTTTGTGGAAGAAGAGTAGAAGTGAAGTAAAGCGATAA 1119 0.4969 MANHHHHHHAHDTNLKSLLDTLYCSEEHWEEDVGEDELDEAENNNTTNNNATSSRSTLINSLHYPHVLFESDMFCDEQELTSLLGKEQHNPLTTCLQTNPALQCAHREAVEWMLRVNAHYSFSALTSLLAVNYFDRFLSTIHFQDAKPWMTHLAAVACLSLAAKVEETQVPLLLDLQVEEGRYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYITRRLGLKDHHCWDFLRKCEGVLVSVLGDWRLMGYLPSELASATMIHVVKSVEPCLEGEYQRQLLGILGFDKEKVNECGKVLELWSGYEKQGKQCMKRKLGSVPGSPNGVMEMSFSCDSSNEAWGVAAAAAAASASGSVCCSAEGLWKKSRSEVKR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03435 372 MobiDBLite consensus disorder prediction 33 54 - -
Viun9g03435 372 PANTHER CYCLINS 82 305 IPR039361 -
Viun9g03435 372 CDD CYCLIN_AtCycD-like_rpt2 209 298 - -
Viun9g03435 372 Pfam Cyclin, C-terminal domain 208 317 IPR004367 -
Viun9g03435 372 CDD CYCLIN_AtCycD-like_rpt1 107 203 - -
Viun9g03435 372 SMART cyclin_7 111 199 IPR013763 -
Viun9g03435 372 Gene3D - 207 295 - -
Viun9g03435 372 SMART Cyclin_C_2 208 335 IPR004367 -
Viun9g03435 372 Pfam Cyclin, N-terminal domain 88 206 IPR006671 -
Viun9g03435 372 Gene3D - 94 206 - -
Viun9g03435 372 SUPERFAMILY Cyclin-like 83 206 IPR036915 -
Viun9g03435 372 FunFam CYCLIN D32 207 296 - -
Viun9g03435 372 FunFam D6-type cyclin 89 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03435 Viun-Chr9 40592304 40594291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03435 1 315 Core Cell Cycle Gene Families AT4G34160 46.082 3.24e-88 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03435 9 40592304 40594291 Viun2g02147 2 29486686 29488503 ECH
Viun9g03435 9 40592304 40594291 Viun3g03874 3 46115251 46117147 ECH
Viun9g03435 9 40592304 40594291 Viun7g03668 7 37599806 37601988 ECH
Viun9g03435 9 40592304 40594291 Viun9g03435 9 40592304 40594291 ECH
Viun8g00377 8 2484258 2486119 Viun9g03435 9 40592304 40594291 PCT