Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03414 ATGGAAACTCGTGCAGAAAAGAGAAAGTCAAATGTCATGGCCTCAGTTGTGGTGCAGAGACAACATCCCAAGAAGCAACGCGTTTGCTTCACTCAACCTTCCAATCTACCAAACTTTGCCGAAACTTCTAGTCTTTGCGAAGAGAAACTGCAATCTCTGTGGAATAATGTCAACCTTAAAAGATCAAATTCCAGGAACAACTTTCTTCCTTCCTCCCAAATTCATGAACTTGATGTTTGGGACATCAACGAGTATCTTCGTGCCTTGGAGATAAAGAGAAGACCAATGGTTAACTATATTCAGAAAGTTCAAAGAACAATTACCTCCAACATGAGAGCAGTATTAATGGATTGGTTAGTAGAACTTGCCGAGCAGCACAATCTTCTCTCGGATACTCTTCTGCTCTGTGTGTCATACATTGATAGGAAGTATGAGGAAGTTGATCCACCCAGTTTGAATGAGTTCTGTAACGTCACTGATAACACCTGTAATAAGACAGAGATTATAAAGATGGAGGCTGAAATACTCAAGACTTTGAATTTTGAGATGGAAAATCCTACTGCAATCACTTTTTTGAGGTTTTTTTCTTGGGCTGCTTCTGATAATCAAAGAACTCCAAATTTGAAGGTTGAATTTTTGGGCTGGTATTTTGTTGAGCTGAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCGTCTGTTGTAGCAGCATCTGCTTTATTTCTAGCCAGATTTTTGATTGATCCTGAAGTGCATCCTTGGACTTCTTCCTTGTTTGAATGTTCGGGTTACAAACCAGTTGAATTGAAAGAGTGTGTTCTCATCTTGCATAATTTGCATTTGTCAAGAAAGGCAGAATCTTTCGAAGCTGTTAGGGAGAAATACAAGCAGCACAAATTCAAATACGTGGCAAATTTACCTTCTCCTTCATATGTACCAAGTTACTACTTTGAAGACCAGTTGCATATGAATGATCAGCAAACGTTATGTACGATTGACAATGTACATTCCACTCCATGA 1020 0.3873 METRAEKRKSNVMASVVVQRQHPKKQRVCFTQPSNLPNFAETSSLCEEKLQSLWNNVNLKRSNSRNNFLPSSQIHELDVWDINEYLRALEIKRRPMVNYIQKVQRTITSNMRAVLMDWLVELAEQHNLLSDTLLLCVSYIDRKYEEVDPPSLNEFCNVTDNTCNKTEIIKMEAEILKTLNFEMENPTAITFLRFFSWAASDNQRTPNLKVEFLGWYFVELSLLDYDCIRFLPSVVAASALFLARFLIDPEVHPWTSSLFECSGYKPVELKECVLILHNLHLSRKAESFEAVREKYKQHKFKYVANLPSPSYVPSYYFEDQLHMNDQQTLCTIDNVHSTP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03414 339 Pfam Cyclin, N-terminal domain 81 142 IPR006671 -
Viun9g03414 339 Pfam Cyclin, N-terminal domain 143 183 IPR006671 -
Viun9g03414 339 Gene3D - 81 94 - -
Viun9g03414 339 Gene3D - 143 178 - -
Viun9g03414 339 FunFam Cyclin A1 172 305 - -
Viun9g03414 339 Gene3D - 179 312 - -
Viun9g03414 339 SMART cyclin_7 190 278 IPR013763 -
Viun9g03414 339 SMART cyclin_7 117 177 IPR013763 -
Viun9g03414 339 Gene3D - 95 142 - -
Viun9g03414 339 SMART Cyclin_C_2 186 309 IPR004367 -
Viun9g03414 339 PANTHER CYCLINS 143 297 IPR039361 -
Viun9g03414 339 Pfam Cyclin, C-terminal domain 186 308 IPR004367 -
Viun9g03414 339 SUPERFAMILY Cyclin-like 186 311 IPR036915 -
Viun9g03414 339 SUPERFAMILY Cyclin-like 74 183 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03414 Viun-Chr9 40473280 40475595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03414 1 319 Core Cell Cycle Gene Families AT5G43080 44.767 3.85e-93 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01071 8 12997602 13001559 Viun9g03414 9 40473280 40475595 PCT