Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02545 ATGATGATGTTCGAGGACATTGGGTTTTGTGGCGATTTGGATTTGTTGAGTTGTCCCCTTGGAGACGAGGATATTGTTGCTGTGAGACAAACGGATCCAGATCCTGTGGTTGAGGATGATTACAGTGATGAAGAAATTGATATGGATGAGCTGGAGAAGCGTATGTGGAGGGACAAAGTGCGGCACAAACGATTGAAAGAACAACAGAAGGCAAAGGAAGGGACAGATGCAGTGAAGCAGAGGCAATCCCAAGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTGAAGTACATGCTGAAGATGATGGAGGTCTGCAAGGCACAAGGGTTTGTTTATGGCATAATTCCTGAGAAAGGAAAGCCAGTGACTGGAGCATCAGACAATCTTCGCGAATGGTGGAAGGACAAGGTGAGGTTTGATCGAAATGGTCCTGCTGCTATAGCAAAGTATCAGGCTGATAATGCAATTCCAGGGAAGAATGATGGCTGCAATTCCATTGGTCCAACTCCACACACATTGCAGGAGTTACAGGACACAACACTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGAAGGTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCCACTGGGTATGAAGAATGGTGGCCTCAAATTGGTCTTCCCAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTTACTGCTGTCATCAAACACATGTCTCCTGATATAGCCAAGATTCGGAAGCTTGTGAGACAGTCTAAATGCCTTCAGGACAAAATGACAGCGAAGGAGAGTGCAACATGGCTTGCCATCATCAACCAAGAGGAAGCCTTGGCTCGAGAGCTTTATCCTGATTATTGCCCCCCGTTTTCCTCTGGTGCAGGTAATGGCTCCATGGTGATCAATGATTGCAGTGAGTATGATGTTGATGGGGCTGAGGAAGAACCAAACTTTGATGTGGAGGACCGGAAGCCAGACCCTCTTCATCCATCTAATCTTGGTGGGATGGAGAGAATCACCGGAAGACTACCACTACAAATTTCTCATCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCAGGAAGAGGAAGATTCCTGGTGACTTCAACCTCATGATGGATCCCAAAATCTATACTTGTGAGCATCCTCAATGCCCTTACAGTGAACCTCGCCTTGGTTTCCCTGACAGGTCGGCTAGGGACCATCATCAACTGAATTGTGCATACAGAAACAGTGCTTCAGATTATGGTGGTGGTCCCAACTTCCATGATGCTGAGGTTAAGCCGGTCATATTCCCTCAGTCATTTGTTCAACCCCACACTACATCTCAGGCTGCAAGTGTGGTTCAACCTTCATTTGGTGTATCTGGGCTTGGAGTTCCGGAGGATGGCCAAAAAATGATAAATGACCTTATGACAATATATGACACAAACGTTGTAGGAAACAATAACTTAAGTTCCAACAACTTTGTAGCCGCAGAAAATCATAACTTTTCTCAGACCATGTTACAGCAACAGCAACAGGACAGTCGTGAGAGTTATTTCACTGGCCAAGGAATGGTGACGGAAGGGAATTTCTTTGCACGAGAGGAAGGACAATTTGAGAGGTTCAAAGCCATGAACATGAACGCCCCTTTTGACACCAACCACATGGTGTTTAGCCCCCAGTGTGATTTGTCATCTTTTGATTTTAAGGATATGCAAGGGGTAGGAATGGATACAGTTCACAGACAGCAGCAAGAGGTTTCAATTTGGTTCCAGTGA 1830 0.4596 MMMFEDIGFCGDLDLLSCPLGDEDIVAVRQTDPDPVVEDDYSDEEIDMDELEKRMWRDKVRHKRLKEQQKAKEGTDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGYEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPFSSGAGNGSMVINDCSEYDVDGAEEEPNFDVEDRKPDPLHPSNLGGMERITGRLPLQISHPFKGDVVTNLDFIRKRKIPGDFNLMMDPKIYTCEHPQCPYSEPRLGFPDRSARDHHQLNCAYRNSASDYGGGPNFHDAEVKPVIFPQSFVQPHTTSQAASVVQPSFGVSGLGVPEDGQKMINDLMTIYDTNVVGNNNLSSNNFVAAENHNFSQTMLQQQQQDSRESYFTGQGMVTEGNFFAREEGQFERFKAMNMNAPFDTNHMVFSPQCDLSSFDFKDMQGVGMDTVHRQQQEVSIWFQ 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02545 609 MobiDBLite consensus disorder prediction 335 354 - -
Viun8g02545 609 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Viun8g02545 609 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Viun8g02545 609 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Viun8g02545 609 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Viun8g02545 609 MobiDBLite consensus disorder prediction 67 92 - -
Viun8g02545 609 FunFam Ethylene insensitive 3-like 1 169 306 - -
Viun8g02545 609 FunFam Ethylene insensitive 3-like 1 81 159 - -
Viun8g02545 609 MobiDBLite consensus disorder prediction 65 92 - -
Viun8g02545 609 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 561 IPR006957 GO:0003700|GO:0005634
Viun8g02545 609 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02545 Viun-Chr8 34829601 34833454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02545 2 608 EIL Transcription Factor Family AT3G20770 58.398 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Viun8g02545 EIN3 1.1e-129 No_clan