Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02156 ATGGGAGACGCAAATGCAGTGAAAGGGGAACGTTCGGGCGGTGAGAAGAGGAAGAAGATGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGGGTAGGATACAAAGTGTGTTCCTCGGACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTAATGGAGGAAGATGGAATTCCCAATCTCGCCTCCGACACTGTGCATTACGACCCAACCGATCTCTACGGTTGGGTCCAGAACATTCTCAACAACGCGCCCAATCATACCCCCACCACCGCCAGTAACAACGCTGCCATTCCATCGCCGTTAATCACTGTCCCCGAGAACGATCGAACAGCGATTCAATTGCCATACATCGAAGCGTATCCACAAACAGAAAATCAGAATTGCCACAAGCGATTCAAGAGTTCTCCGTCTCCGTCTCCGTTGTGGCCCGCGATTTCATCGGACAACGTGCTTCCGGTGGTTCTTGTGGAGGAAGCCGGCGTGCATCTCGTCCATGCACTCATGGCCTGCGCGGAGGCCATTCAATTAGGAAACGCGAGCCTCGCGTCAGACCTCGTGAAGCATGCAGGAAACCTCGCTGCGTCACAAGGAGGTTCAATGGGGAAGGTTGCATCGTTCTTCGCTCAAGCTCTCGCTCGAAGAATCTATGGATTCTACCCTCACGAGACTCTAGACACTTCCTACTCCGACTTGCTTCACACACATTTCTACGAATCGAGCCCGTACCTGAAATTCGCGCACTTCACGGCGAACCACGCCATCCTCGAAGCATTAGCCACCGCGGACACGGTGCATGTTATCGATTTTGGCCTGAAGCAGGGGTTGCAGTGGCCTGCGTTCATGCAAGCACTCGCGGTCCGTCCGGGAGGTCCGCCAGCGTTCCGCCTCAGCGGGATCGGACCGCCGCGGCTCGACGACCCCGATTCGGACTCGCTGAGTCAGGTCGGTTTGAGACTGGCGGAACTCGCTCGAAGAATTAGGATTCCATTCGAGTTCCGCGGATTCGTGTGTAACAGTTTAGCGGACCTAGATCCGTCCGTGCTCGAGATCCGAGCCGGAGAATTCGTGGCGGTTAACTCCATCTTCGAGCTTCACCGCTTGCTGGCGCGGCCTGTTGACATTGAAAAGGTGTTAGCCACGGTTAAGACGATTAAACCAGAGATATTTACAGTGGTGGAGCAAGAAGCGAATCACAACGGTCCGGTTTTTCTAGAGCGGTTCACGGAAGCATTGTACTATTACTCGAGTTTGTTTGACTCGATGGAGGGATCGATGGCGGCGCCGAGTGAACAGGCGCTGGTGATGGCGGAGATGTACTTAGGGAGGCAGATATGTAACGTGGTGGCGTGTGAGGGGGATGAACGCGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGAGAACGGTTCGGTTTGGGCGGGTTCGAACCGGTTCGCATGGGTTCGAACGCGTTCAGACAAGCGAGGATGTTACTGGGCCTATACGATGAGGGGGGAGAAGGGTACAGAGTGGAAGAAAACAATGGGTGCCTCTTGCTTGGGTGGCACACGAGGCTAGTCGTTGCCTCGTCCGCGTGGAGAGTCGCGCCCAATGGTTTGCACCCAGTTAGAGATCAGAGTGAGATGAACCAAGATTCCCGATACTGTTAA 1662 0.5445 MGDANAVKGERSGGEKRKKMFEEEENEDKLLAGVGYKVCSSDMVDVAHKLDQLEMVMEEDGIPNLASDTVHYDPTDLYGWVQNILNNAPNHTPTTASNNAAIPSPLITVPENDRTAIQLPYIEAYPQTENQNCHKRFKSSPSPSPLWPAISSDNVLPVVLVEEAGVHLVHALMACAEAIQLGNASLASDLVKHAGNLAASQGGSMGKVASFFAQALARRIYGFYPHETLDTSYSDLLHTHFYESSPYLKFAHFTANHAILEALATADTVHVIDFGLKQGLQWPAFMQALAVRPGGPPAFRLSGIGPPRLDDPDSDSLSQVGLRLAELARRIRIPFEFRGFVCNSLADLDPSVLEIRAGEFVAVNSIFELHRLLARPVDIEKVLATVKTIKPEIFTVVEQEANHNGPVFLERFTEALYYYSSLFDSMEGSMAAPSEQALVMAEMYLGRQICNVVACEGDERVERHETLGQWRERFGLGGFEPVRMGSNAFRQARMLLGLYDEGGEGYRVEENNGCLLLGWHTRLVVASSAWRVAPNGLHPVRDQSEMNQDSRYC 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02156 553 MobiDBLite consensus disorder prediction 1 26 - -
Viun8g02156 553 ProSiteProfiles GRAS family profile. 159 531 IPR005202 -
Viun8g02156 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 132 525 IPR005202 -
Viun8g02156 553 MobiDBLite consensus disorder prediction 9 26 - -
Viun8g02156 553 Pfam GRAS domain family 168 531 IPR005202 -
Viun8g02156 553 Gene3D - 26 87 IPR038088 -
Viun8g02156 553 SMART DELLA_2 28 99 - -
Viun8g02156 553 Pfam Transcriptional regulator DELLA protein N terminal 28 87 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02156 Viun-Chr8 31856753 31858912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02156 15 533 GRAS Transcription Factor Family AT2G01570 53.968 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun8g02156 GRAS 1.8e-128 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02156 8 31856753 31858912 Viun8g02156 8 31856753 31858912 ECH
Viun1g03052 1 38952567 38954987 Viun8g02156 8 31856753 31858912 PCT