Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02093 ATGGTTCTCTCCAAAACGGCATCGCAGACGGACGTTTCTGTCCATTCAACCTTCGCCTCTCGCTATGTGCGCACAGTTCTTCCCAGGTTCAAGATGGGAGAGCTATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGTTGGACGGAAATCCGAGGCTGAACCTGGCGTCGTTTGTGACGACGTGGATGGAGCCTGAATGTGACAAACTCATAATGGCTGCCATTAACAAAAACTATGTGGACATGGATGAGTACCCTGTCACCACTGAACTTCAGAATCGTTGCGTTAACATGATAGCTCACCTTTTCAATGCACCACTGGGAGAGTCAGAAGCTGCCGTTGGTGTTGGTACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAAAGGAGATGGCAGAATAGAAGGAAAGAAGAAGGGAAGCCTTGTGATAGTCCCAATATTGTTACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAGGTGAAGCTGAGTGATGGATACTTTGTAATGGACCCTGAAAAAGCAGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTTTGAACGGAGAGTTTGAAGATGTCAAGCGCTTAAATGATCTCCTACTAGAAAAGAATCAGGCAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCATTTCTTTATCCAGAGCTTGAGTGGGACTTTCGGCTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAACCAAGGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTATCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCCCAGTACTACCAACTAATTCGACTGGGTTTTGAGGGATACAAAATGGTGATGGAAAACTGCACAGACAACATGGCAGTGCTTAAGGAAGGACTAGAGAAAACTGAAAAGTTCACCATTGTGTCTAAAGACATCGGTGTCCCATTGGTGGCCTTCACTTTGAAGGACCACAGCCACTTCAATGAGTTCCAAATCTCTGATCTTCTGAGGCGCTATGGATGGATTGTGCCAGCATACACTATGCCCCCAGATGCAGAACATGTCACAGTGCTTCGTGTTGTGGTTAGGGAGGACTTCTCTCGCACCCTTGCGGAGCGTCTTGTCACTGATCTCACCAAAGTGGTGCGCGAGCTGGAGCTGCTTCCTGCTAGGGTAATCAGCAGCACCGTAACGACTACTGCCGGAGAAGATGGTGAAGTCACCGAGGGAAAAGTATTGATTGCCAAGAAGAGTGAACTAGAGACACAGAGAGCAATCACTTCAGCTTGGAAGAAGTTTGTGATGGAGAAGAAGAAGACGAATGGTGTTTGTTAG 1512 0.4716 MVLSKTASQTDVSVHSTFASRYVRTVLPRFKMGELSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRRWQNRRKEEGKPCDSPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLLEKNQATGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKMVMENCTDNMAVLKEGLEKTEKFTIVSKDIGVPLVAFTLKDHSHFNEFQISDLLRRYGWIVPAYTMPPDAEHVTVLRVVVREDFSRTLAERLVTDLTKVVRELELLPARVISSTVTTTAGEDGEVTEGKVLIAKKSELETQRAITSAWKKFVMEKKKTNGVC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02093 503 FunFam Glutamate decarboxylase 66 360 - -
Viun8g02093 503 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Viun8g02093 503 Gene3D - 66 360 IPR015421 GO:0003824
Viun8g02093 503 Gene3D - 361 448 - -
Viun8g02093 503 FunFam Glutamate decarboxylase 361 448 - -
Viun8g02093 503 Gene3D - 1 65 - -
Viun8g02093 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Viun8g02093 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 39 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Viun8g02093 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Viun8g02093 503 FunFam Glutamate decarboxylase 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02093 Viun-Chr8 31356459 31361674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02093 1 503 Calmodulin-binding Proteins AT5G17330 82.143 0.0 872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02093 8 31356459 31361674 Viun8g02093 8 31356459 31361674 ECH