Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00390 ATGGACCCGTCTATCATGAAGCTGCTAGAAGATGATGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGATGTGTCTGCTTCTCAGTTTCCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTCATCACAGTGGCCTACTTCTAACCATGACAACCAAAGTGATGGTCAAAATCAAGAGCCTAAAACTGCACAAGAGCAACATTCATCTGAGATGGAGCCGAAGCAACATGGGTCTCTTGGCGAACACCTTCAGCATGTTGCTTCTCAGGATGTAAATAATATTCATTTATCACAGAAACAATCTCAAGATGACAGTCACCAAGCACCTGCTGTACAAGTTCCCCTCCACAATTCTCAAACTATCGGAATTCATAATTCTGGAAAAGATTCAGTCCTTAATAAAGAAGTAGTAAAGAGTCATAATCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGTAAATCGTAGTAATAAGCAGGTACCATTTGGCCTGTTGCTACCCATTTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTGTTTACAAAATTGAAGAAAGATGAAATACCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGACAAGCATTAGCAAAGGTGCAAATGCAACCTCAGGCAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCTTCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCTAGACAATTGAATGATCCCCATGCTTTAGCACAGATGCATCAAAGAAGTATGAATGTTGCCGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACCATGGATAGCAATGCCAGAAAATCTCAGGAATTCGATGTTAAAATAGAATCTCAAGGATTGCAGCCAAACCAGTTGACGTCTTCCAATTCCAACTCAATAGGTCAAGAAACAGAAAGAGCATCAGTTCACATACAAGGGCTCAATAAGCAGCAGCAACACCATCTACATTTTGCATCAGCGTATGGAAACAGTGGTGGTAACTATAACCCTTATTCTGGGACAACAAGCAGTTCCACTTCGTCTATCAAACCGCAATCACATGATTCACACATGAATCAAATTCCTCATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAGTGTAATTGGTATGCCAAAACTTGAACAGCAGACTTCTTTCAATGATCCCAAGAGATTGCCAGGTGGATCTGTGTCTTCTGCTGTAAACAATACAGCATCTCAACAAACTTCAAATGCTTGGCAACCATCAACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTGAAGAAGGAACCTGGTGACTTGTCCACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCCAGTCAAGGAGCTCTAAAAGACGAGTTTTCAAGAGGTCTTCCAGCATCCACAAACATGCCACCTACAACATCTACTGGCTTGCTACCACACAGTTCTGCTTCCGCTTCTGCTGTGAACCACCTAGACTCCAGTGTCTTGCTAAGCTCTCAGATTCCATCAAATGCTTCTGGAATTGCTGCAAGGCCATCCCTTAAAAAGTCTGCTGCTACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCTAGTAAAAAGCAAAAAACTTCTGGCGGATATGCTGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCATCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGAGTGTGGAGGAAAGGATGCGTGGACTGATAAGTAACCTGATTAGATTATCAAAACAGAGGGTTGATTTTGAGAAAACGAGACATCGGACTGTTGTCACTTCAGACGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCGGAAGCAGAGAAGCTTCGGAAACTAAATGATGTTGACGGCAATACTGGAGGTGATGGTGACAAGGATAAGGACGATGGCCGTTCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCGAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAAAAACGTGAAGGGGGAGTGGACGTGTCATCTGGTTCTCAACCAGCTAAAGATGTGAACCGCAAATCTTCATCAACATCTGAAAGAAGTACAAAGGATAACCAAGAAGGGGAGAAAAGAGGTTCAACCCCTTTTCTAGCAAGTTCAGTGGCCAGAAAACTTGGGAAGAGTCATGCCGTGGCCCCTCAAACTAGGGTAGCTCGAAGCATCTCTGTGAAGGATGTGATTGCAGTCTTGGAGAGGGAGCCCCAAATGTCTAAATCCCCACTCATACATCGTTTGTACGAGAAAATTCATTCTGAAGCCCCAGTTGAACAAGGTTAA 2811 0.4358 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFPGSDAVLSQGSNNTSSQSSSQWPTSNHDNQSDGQNQEPKTAQEQHSSEMEPKQHGSLGEHLQHVASQDVNNIHLSQKQSQDDSHQAPAVQVPLHNSQTIGIHNSGKDSVLNKEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSSQVNRSNKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEIPKDSFVRLMKGIVGDQMLRQALAKVQMQPQARPNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSMNVAVDQSRMSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSNSNSIGQETERASVHIQGLNKQQQHHLHFASAYGNSGGNYNPYSGTTSSSTSSIKPQSHDSHMNQIPHQSIGSNHLGGSTHGLSVIGMPKLEQQTSFNDPKRLPGGSVSSAVNNTASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPGDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGALKDEFSRGLPASTNMPPTTSTGLLPHSSASASAVNHLDSSVLLSSQIPSNASGIAARPSLKKSAATQKKPLEALGSSPPPSSKKQKTSGGYAEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRLSKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKLRKLNDVDGNTGGDGDKDKDDGRSKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVSSGSQPAKDVNRKSSSTSERSTKDNQEGEKRGSTPFLASSVARKLGKSHAVAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSEAPVEQG 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00390 936 MobiDBLite consensus disorder prediction 581 620 - -
Viun8g00390 936 FunFam Transcription initiation factor TFIID subunit 4B 669 716 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 851 868 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 826 892 - -
Viun8g00390 936 Pfam Transcription initiation factor TFIID component TAF4 family 626 922 IPR007900 GO:0005669|GO:0006352
Viun8g00390 936 MobiDBLite consensus disorder prediction 764 802 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 36 101 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 605 620 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 332 351 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 388 407 - -
Viun8g00390 936 ProSiteProfiles RST domain profile. 190 261 IPR022003 -
Viun8g00390 936 MobiDBLite consensus disorder prediction 86 100 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 439 476 - -
Viun8g00390 936 MobiDBLite consensus disorder prediction 1 21 - -
Viun8g00390 936 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 6 928 IPR045144 GO:0005669|GO:0006352
Viun8g00390 936 MobiDBLite consensus disorder prediction 538 554 - -
Viun8g00390 936 Pfam RCD1-SRO-TAF4 (RST) plant domain 193 256 IPR022003 -
Viun8g00390 936 Gene3D Histone, subunit A 671 716 IPR009072 GO:0046982
Viun8g00390 936 MobiDBLite consensus disorder prediction 533 554 - -
Viun8g00390 936 Coils Coil 746 766 - -
Viun8g00390 936 CDD TAF4 621 922 IPR007900 GO:0005669|GO:0006352
Viun8g00390 936 MobiDBLite consensus disorder prediction 44 85 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00390 8 2647772 2657482 Viun8g00390 8 2647772 2657482 ECH