Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00378 ATGGGACGTTGGGCAATTGCTGTGCATGGTGGCGCCGGTGTGGACCCTAATCTCCCACTCGAGCGTCAAGAAGAGGCGAAACAACTTCTCACCCGCTGTCTCAACCTTGGAATGTCTGCTCTGCGTTCCAATGTTTCCGCCATCGATGTTGTCGAACGTGTGGTGAGGGAGTTGGAAACGGATCCTCTGTTCAATTCGGGTCGTGGATCTGCCCTGACGGAGAAAGGAACCGTGGAAATGGAGGCCAGTATCATGGATGGGACAAAACGGCGCTGCGGTGCTGTTTCGGGTCTGACCACCGTCAAGAACCCCGTTTCGCTGGCTCGTTTAGTGATGGACAAATCCCCACATTCATACATCGGTTTCTCCGGCGCTGAAGCATTCGCCAGACAACAGGGTGTGGAGGTTGTGGACAACGAGTACTTTATCACCCCTGACAATGTGGGCATGTTGAAGCTGGCAAAGGAAGCCAACACAATCCTGTTTGATTACCGAATCCCGAACTCGGGTACATGTGGATCCGGTGTGGGGACTCCACTGCAGATGAATGGACTCCCGATAAGCGTGTATGCGCCGGAGACAGTTGGCTGCGTGGTGGTGGACCGGGAGGGGCGGTGCGCGGCGGCGACGTCAACCGGTGGCCTGATGAACAAAATGACCGGGCGAATCGGTGACTCGCCGCTGATCGGTGCTGGGACTTATGCGTGTAATCTGTGTGGTGTCTCGTGCACGGGTGAGGGCGAGGCCATCATACGTAGCACTCTGGCGCGTGAGGTGGCAGCGGTGATGGAATACAAAAACCTGAAGCTTCACGATGCCGTTGATTTTGTGATCAAGCACCGTCTCGATGAAGGAAAAGCCGGGCTCATTGCGGTTTCCAATACTGGGGAAGTGGCTTGTGGGTTCAATTGCAATGGCATGTTCAGGGCTTGTGCCACTGAAGATGGTTTCATGGAGGTTGCAATTTGGGAATAA 975 0.5487 MGRWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGMSALRSNVSAIDVVERVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPVSLARLVMDKSPHSYIGFSGAEAFARQQGVEVVDNEYFITPDNVGMLKLAKEANTILFDYRIPNSGTCGSGVGTPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACNLCGVSCTGEGEAIIRSTLAREVAAVMEYKNLKLHDAVDFVIKHRLDEGKAGLIAVSNTGEVACGFNCNGMFRACATEDGFMEVAIWE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00378 324 Pfam Asparaginase 4 323 IPR000246 GO:0016787
Viun8g00378 324 CDD Asparaginase_2 5 316 - -
Viun8g00378 324 FunFam Isoaspartyl peptidase/L-asparaginase 194 324 - -
Viun8g00378 324 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Viun8g00378 324 PANTHER L-ASPARAGINASE 3 310 IPR000246 GO:0016787
Viun8g00378 324 Gene3D (Glycosyl)asparaginase 194 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00378 Viun-Chr8 2506441 2508266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00378 3 258 Miscellaneous Gene Families AT4G00590 27.500 1.14e-16 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00378 8 2506441 2508266 Viun8g00378 8 2506441 2508266 ECH
Viun8g00378 8 2506441 2508266 Viun9g03434 9 40567264 40569156 PCT