Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00370 ATGAGTAGCATGCCTGCAAAATTGTTGGTCACAATTTTGTACATCTTCTTGGTGTCTCTTCCTGTGCAGATGTCACCACATGAATATGATGTTAACACAAAAAGTCTCAGAAGAAGTAGTAGCAGTGGCCACAGGAGCAAAGGTAATGGTAGTGGTGGTGGTGGTGGTGGTGGTGGCTCAGCCAAAGGTTGCAACCACAGCAACAAAAACACCACCCCATGTCAAAAATCTACTACCATTGAAGCAGTTCCAACTTCACCCCCTCTTGTTTTTGCAGACCAAAGACTTGAAGTAGTGTACCCAGTAATCCAAAAGTTCAAATCTTCCATCACTTCAGATCCTCTGGGAGTGACAAACACTTGGGTTGGATCAGATATATGCAGCTACAGAGGCTTCTTCTGTGACACTCCCCCTGATAACAGTTCTGCCACTGCTTTGGCCTCTGTTGATTTCAATGGCTTTCAACTTGCTGCTTCCACCCTTGATGGTTTCATTGATAACCTCCCTGATATTGCTCTCTTCCATGCCAATTCCAACAATTTTGGTGGCACAATCTCACCCCAAATAGCCAAACTCCCTTACCTATATGAGCTTGATGTTAGCAACAATCAGTTATCTGGTCCATTTCCCTCTGCTGTTCTAGGCATGAGTGGTTTAACATTCTTGGACTTGAGGTTCAACTTTTTCTCTGGGGCAGTGCCACCACAGATATTCATACAGAACCTGCAAGTCCTTTTCATAAACAACAACATCTTCACACAAGGGTTGCCAGATAACTTAGCCACCACTCAGATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATCCCAAGGAGTCTTCCCAAGGCTTTGGCCACTCTAAGTGAAGTGTTGCTACTTAACAACCAGTTAACAGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCCACAGTGTTTGATGCTGGGAACAACCAATTGACAGGTCCTTTGCCTCTATCTTTGAGCTGTCTGCAGAAGGTGGAGGTGCTCAATTTGGGTGGTAATCTTTTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTCACACATGTGGGGCCACTCTGCAGGATGCTGATTCAGAGAGGGGTTCTTGATGTTAGCAACAATTGTATTCCTGATCTTCCCTTTCAGAGATCAGTGATTGAGTGTGCTCAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATCTGGTTTTATAGTCTCATCCCTTGTAAGCTTCCTTTTCAAAATCCCATTCCTTAG 1317 0.4412 MSSMPAKLLVTILYIFLVSLPVQMSPHEYDVNTKSLRRSSSSGHRSKGNGSGGGGGGGGSAKGCNHSNKNTTPCQKSTTIEAVPTSPPLVFADQRLEVVYPVIQKFKSSITSDPLGVTNTWVGSDICSYRGFFCDTPPDNSSATALASVDFNGFQLAASTLDGFIDNLPDIALFHANSNNFGGTISPQIAKLPYLYELDVSNNQLSGPFPSAVLGMSGLTFLDLRFNFFSGAVPPQIFIQNLQVLFINNNIFTQGLPDNLATTQILLLTLANNKFMGPIPRSLPKALATLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLQKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPLCRMLIQRGVLDVSNNCIPDLPFQRSVIECAQFFATPRMCPFIWFYSLIPCKLPFQNPIP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00370 438 MobiDBLite consensus disorder prediction 33 48 - -
Viun8g00370 438 Gene3D Ribonuclease Inhibitor 101 267 IPR032675 -
Viun8g00370 438 SUPERFAMILY L domain-like 104 396 - -
Viun8g00370 438 MobiDBLite consensus disorder prediction 63 79 - -
Viun8g00370 438 Gene3D Ribonuclease Inhibitor 268 408 IPR032675 -
Viun8g00370 438 MobiDBLite consensus disorder prediction 33 79 - -
Viun8g00370 438 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 67 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00370 Viun-Chr8 2404430 2406049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00370 81 415 Leucine-rich Repeat extension Gene Families AT3G24480 42.388 3.14e-84 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00370 8 2404430 2406049 Viun8g00370 8 2404430 2406049 ECH