Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00360 ATGGCGAGACTCGCTCACCCTCTCAGTATCTTCACACAACCCCATTACTGGCGCCCACTTCTGTGTTGCCACTACTTCAAACGTACCCTAACTGCTGGTACTAACTTCTCCTCCCTCACTACATTAGCTCGAACGGACAAATCACAAGAGGGAGGAACAACCACGGTTAAGCTTTCAATCAAAGCGAGAAGAAAGGCTTTCTATGAATCTCCTGAAGGGGTCTTATTGCGTAAGTTAAACCAGTGCTCAAACGAGGGAGATGTTGTTCAAGCCCTTTGCCACTATGATGAGGCTAGAAAATTGGGGGTTGTACTCAACCTTGATCACTATAACAATTTGCTATACTTATGTTCTATTGAAAATGCTGATGTTGCCCAAATGGGCCTCAAAAGGGGGTTTGAGATATTCCAGCAGATGTTGAATGATCGAGTTCAGCCCAATGAAGCCACCTTTACCAATGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCCGATATGGCTTTCGAATTACTAAAGCAGATGAAGAATGTTGCTATTGCTCCCAGGCTAAGATCGTATGAACCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAAGCTTATCTAGTTGATGCTGACATGATTGAGTCTGGTATTGTGGCTGAAGAGCCTGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAAAACAAAGAAGGAAGACAGGGTATATGAGATTTTGCACCGTTTGCGTGCTACTGTGAGACAAGTATCTGAATCAACTTCACTGATAGTTCAGGACTGGTTCAACTCAGAATATGCTGCAAAAATTGGAAAGGAGAAGTGGGATGTGAATAAAGTGAGGGAAGGGATTCTTCAGGGAGGTGGAGGATGGCATGGTCAAGGGTGGCTTGGGAGTGGGCGATGGAAGATGGTGGAGACTCAGGTGAACGAGGATGGTGTGTGTGTCTCGTGTGGCGAGAAGCTTGTGAGCATTGATATTGATCCAAAAGAGACCGAAACCTTTGCTGCCTCATTATCTAAATTAGCTTGCCAAAAAGAAGCCAAGGAAAACTTTGTTCATTTTCAGAAGTGGCTTGAGCGGCATGGCCCATTTGATGCTGTTGTAGATGGTGCAAATGTAGGCCTTTCCAATGGGCATAATTTCAGCTTTTCGAGGCTTAATACTGTTGTTAAACAATTACGTCAAATAAGCCCTTCCAAGAGGTTGCCCCTTATAATTTTGCATGCAAGCCGGGTATATGGTGGTCCTGCTCAAAATCCAAAAAACAGGAGACTTATAGAAAATTGGAAAAAAAATGGTGCTCTTTATGCTACACCTCAAGGTTCAAATGATGACTGGTACTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAAATGATGAGATGAGGGACCACTTGTTTCAGCTACTTGGTTCTAGTTTTTTCCCGAGATGGAAGGAAAAGCATCAGGTTCGAGCATTAACCTCAACTTCTGGAGGCTCCCTAATAATGCCTCCATGTTATTCTATAGTTATTCAGGAATCAGCCAATGGTAGCTGGCACGTGCCAACTGTAACTAGTGATGATCCTGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAAAAACAATTCATTGCATAGATATGGACATCCTCCTCCAAGTCTGACTGATTGCACATGA 1680 0.4381 MARLAHPLSIFTQPHYWRPLLCCHYFKRTLTAGTNFSSLTTLARTDKSQEGGTTTVKLSIKARRKAFYESPEGVLLRKLNQCSNEGDVVQALCHYDEARKLGVVLNLDHYNNLLYLCSIENADVAQMGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIAPRLRSYEPALFGFCKRGDAEKAYLVDADMIESGIVAEEPELSALLEVSVKTKKEDRVYEILHRLRATVRQVSESTSLIVQDWFNSEYAAKIGKEKWDVNKVREGILQGGGGWHGQGWLGSGRWKMVETQVNEDGVCVSCGEKLVSIDIDPKETETFAASLSKLACQKEAKENFVHFQKWLERHGPFDAVVDGANVGLSNGHNFSFSRLNTVVKQLRQISPSKRLPLIILHASRVYGGPAQNPKNRRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRALTSTSGGSLIMPPCYSIVIQESANGSWHVPTVTSDDPEIPRKWLCATRSKNNSLHRYGHPPPSLTDCT 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00360 559 Gene3D - 328 502 - -
Viun8g00360 559 PANTHER UNCHARACTERIZED 61 540 - -
Viun8g00360 559 FunFam Proteinaceous RNase P 1, chloroplastic/mitochondrial 72 337 - -
Viun8g00360 559 Pfam Protein-only RNase P 310 536 IPR031595 -
Viun8g00360 559 CDD PIN_PRORP-Zc3h12a-like 368 490 - -
Viun8g00360 559 FunFam Proteinaceous RNase P 2 328 502 - -
Viun8g00360 559 Pfam Pentacotripeptide-repeat region of PRORP 63 269 IPR033443 -
Viun8g00360 559 Gene3D Tetratricopeptide repeat domain 71 539 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00360 Viun-Chr8 2337548 2348377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00360 79 240 Miscellaneous Gene Families AT4G11690 24.540 1.08e-09 59.3