Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00346 ATGGGTTCCAGAAATCTATTTGGTGTCAATTATCTGTTGCTTAAGCCAGAAGAAGCAACTGTGTTTGATCTTGGGACCCTCTTGTTCTCTTCCAAGTTGAGCAATAGAAGATTCATAGAGTGCCCAGAAGGGGTTGAAGCAGAATATTTTCGACAAAGATGGCTCATCTTCACATCTGTTGTGGCACAGATTCTCCTTCTTGCCTCAAGAAACTCCTTGAAAAGGTTCGGGGACATGTTGGAGTTTTGGATCAATCTTTTATCATGGAATGGAGGTTTCAAAGGACTCTTCTTCAACATTCTAAGAGGAAAGGTGAAAATACCAGAAAAATCATCAGCATCATATTTATCTGTGGTGGGTTGCATTGACACACGAGTTGACTTAGACAAAAACATTAAACAAAATGATGCCAAATACGAAGGATCCCTCTCAATGATGGCTTCAAAGTTGTCCTACGAAAATGAAAATGTTGTTTGTAACGCAGTGCAAAATCATTGGAATATGGAGTTTTTGGGGTTACACAGCTTCTGGAACGATTACCAAGAGCAGTGGTCGACAAAAGCAATCATATTGCAAGATACGAAGTCGGAACCGAAGTTGATTGTTGTTGCATTCAGGGGTACAGAGCCATTTGATGCAGACCAATGGAGAACAGATGTGGATCTCTCTTGGTACAACTTTGCCAATGTGGGTAGGATACATGTTGGCTTTATGAAAGCATTGGGTCTTCAGAAGAATTTTGGATGGCCCAAAGAGATTGATCAAACCAACCCCTATTCTTACGCCTACTATACAATCAGAGAGAAGCTCAGAACAATGTTGAAGGAAAATACGGATGCAAAATTCATACTTACAGGCCACAGTTTGGGAGGAGCCTTGGCCATTCTCTTTGCTGCTCTTCTCACAATACATGAGGAGACATCGCTGTTGGAGAAATTAGAAGGGGTTTATACATTTGGGCAGCCACGAGTTGGGGACTATGAGTTTGGGGAGTTCATGAAGGACAAGCTCAGAAAGTATAATGTGAGATTCAAGAGGTATGTTTACTGCAATGATGTGGTGCCTAGGGTCCCTTACGATGACAAAAACCTCTTCTATAAACACTTTGCTCCTTGCCTCTACTTCAACAGCTTCTACCGGGGGCAGGTTCTAGAGGAGGAGCCAAACAAGAACTATTTTTCTGTGTTCTGGGTCATACCCAAGTTGCTAAACGCAGTCTGGGAGCTTATTAGAGGATTTCTTCCCGCCCTCCTAGTAGGTGAAAGCTATACTCAGAACTGGTTCATGACGATAATGAGGATCTTTGGATGCATGATTCCAGGAATACCCGAACATCTTCCTCCAGATTATGTCAATGTTACCAGGTTGGGAACTTTACCTCAAAACTCGCAAGATTCCAAGACTGACTGA 1410 0.4234 MGSRNLFGVNYLLLKPEEATVFDLGTLLFSSKLSNRRFIECPEGVEAEYFRQRWLIFTSVVAQILLLASRNSLKRFGDMLEFWINLLSWNGGFKGLFFNILRGKVKIPEKSSASYLSVVGCIDTRVDLDKNIKQNDAKYEGSLSMMASKLSYENENVVCNAVQNHWNMEFLGLHSFWNDYQEQWSTKAIILQDTKSEPKLIVVAFRGTEPFDADQWRTDVDLSWYNFANVGRIHVGFMKALGLQKNFGWPKEIDQTNPYSYAYYTIREKLRTMLKENTDAKFILTGHSLGGALAILFAALLTIHEETSLLEKLEGVYTFGQPRVGDYEFGEFMKDKLRKYNVRFKRYVYCNDVVPRVPYDDKNLFYKHFAPCLYFNSFYRGQVLEEEPNKNYFSVFWVIPKLLNAVWELIRGFLPALLVGESYTQNWFMTIMRIFGCMIPGIPEHLPPDYVNVTRLGTLPQNSQDSKTD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00346 469 Gene3D alpha/beta hydrolase 129 398 IPR029058 -
Viun8g00346 469 SUPERFAMILY alpha/beta-Hydrolases 145 393 IPR029058 -
Viun8g00346 469 Pfam Lipase (class 3) 202 361 IPR002921 GO:0006629
Viun8g00346 469 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 9 464 IPR044819 GO:0004806|GO:0006629
Viun8g00346 469 CDD Lipase_3 143 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00346 Viun-Chr8 2173388 2178497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00346 10 468 Acyl Lipid Metabolism Gene Families AT1G56630 52.411 5.26e-177 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00346 8 2173388 2178497 Viun8g00346 8 2173388 2178497 ECH