Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00336 ATGGAAGACGGCGAAACGACGGAGGAGGTGGTTGTCGTTCCGGTTTCCAATAGCGACGGCGTCGGTGACGAGCAAATGTTTCCGCATTCCCCACGACAATGCGATTCGGAAGAGGAGTCTCCGCACGAATCGTTGCGTAAAACGAAAGCTTCAATAGAAAACGCCGTCGCCGAGATTATCGCTCTGAAGAAACATGCCGAACCCAAACCGCTCCTCACTCTCCGACTCAGAGAGCTGCTCACTCAAACGTTCCTCCATTTCGTCACTCTTCGCCAGGCCAATCGCTCCATCTTGTTGGAGGAGGAGCATGCGAGAACGGAAACTGAGCGTGCGAAGGCGCCTCTGGAACTCACCACGCAGCAGCTTCAGAACCTGATGTACGAGAAGAGTCACTACGTGAAGGCAATAAAGGCGTGTAACGATTTCAAGTCCAAGTATCCTGATATTGAGGTGGTGTCGGAGGGAGAGTTTTTTCGTGACGCACCGCAGGACATGAAGGACTCCGTTTTGTGTAGCCACAGTGAACATAATCTCGTGCTGAAGAGACTCAATTTTGAGTTGTTTCAGCGCAAAGAGCTTTGCAAGCTTCATGACAAACTGGAGCAGAAAAAGAAAACTCTTTTGGAGACAATTGCAAACCGAAAGAAGTTCTTGTCTAGCCTCCCTTCACATCTCAAGTCTCTAAAGAAAGCATCCTTGCCAGTGCAAAATCAACTAGGAGTTCAGCATACTAAGAAACTAAAGCGGCATCACTCAGCAGAGTTGCTTCCACCACCTCTTTATGTGATTTACTCACAACTGTTGGCTCAAAAGGAGGCGTTTGGAGAATCTATTGATGTGGAGATTGTAGGAAGTGTCAAAGATGCTCAAAATTTTGCCCACATTCAAGCTCACAAGGACACTGATATTATGGCTGCTGCTGGTCCGTCCAGAAGAGAAGTTTTCCTCGAGCTGAGAAGAAAAAGACTAGAGGAGGAAAAAAGAAGAACATGTGAAAGCTCCCATCGCTCTGGTACTGAATCTGACGCTCAGAGGGGTGACTTGCTGCCCCCTCCAGCTGAAAAGAAGAAAAGCAAGCACAAGGACTGCCCTTCCAAGCCTAGTACCCCTCAACCTCCTTCACCCAAGAAGACTTGGGGAAGTGTTTCAAATGAAAGCATGCCAGACTCCTTTGTAACCCTGTTTGACTCCCAACTGAAGATTAGCGAAGGCATAGAAGTGTCCCTCTCGGCAGAGGAAGTTGACATTGTCTCGGCCCTGCACGCAAAAACTGTACTGTATGTGCTAAATGAATTTCAGGCTAGGGCCATGGTGATGGGCCGCCACCTGGAAACAGTCTTGAGCAAACTGCCCGATGCAAACAAGTTGGGAGCTGAAATAAAGACCCTACAGAGTGAGTTGGCCGAGGCAAACAGGCAGATGCAGGAAATGTCCCTATAG 1440 0.4868 MEDGETTEEVVVVPVSNSDGVGDEQMFPHSPRQCDSEEESPHESLRKTKASIENAVAEIIALKKHAEPKPLLTLRLRELLTQTFLHFVTLRQANRSILLEEEHARTETERAKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDKLEQKKKTLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTDIMAAAGPSRREVFLELRRKRLEEEKRRTCESSHRSGTESDAQRGDLLPPPAEKKKSKHKDCPSKPSTPQPPSPKKTWGSVSNESMPDSFVTLFDSQLKISEGIEVSLSAEEVDIVSALHAKTVLYVLNEFQARAMVMGRHLETVLSKLPDANKLGAEIKTLQSELAEANRQMQEMSL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00336 479 Coils Coil 453 479 - -
Viun8g00336 479 MobiDBLite consensus disorder prediction 1 47 - -
Viun8g00336 479 MobiDBLite consensus disorder prediction 325 383 - -
Viun8g00336 479 Coils Coil 190 210 - -
Viun8g00336 479 MobiDBLite consensus disorder prediction 30 47 - -
Viun8g00336 479 MobiDBLite consensus disorder prediction 349 364 - -
Viun8g00336 479 PANTHER FMS INTERACTING PROTEIN 35 349 IPR019163 -
Viun8g00336 479 MobiDBLite consensus disorder prediction 325 342 - -
Viun8g00336 479 Pfam Fms-interacting protein/Thoc5 89 345 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00336 Viun-Chr8 2149634 2154734 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00336 8 2149634 2154734 Viun8g00336 8 2149634 2154734 ECH
Viun8g00336 8 2149634 2154734 Viun9g03464 9 40855092 40860783 PCT