Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00328 ATGGATGCAATTTTCGCTTACATCATTGTCATTTTTCTTACCTTATTTTCATTCATGTTCTTACCAAAACTAAACAGAAGAAAACCTCAGAACCAAACAACCGCAAAGCTCCCTCCAGGTTCAATGGGTTGGCCGTACATAGGAGAAACCCTCCAACTCTACTCCCAAGACCCAAATGTCTACTTTTCCACCAAACACAAAAGGTTTGGTGAGATATTTAAGACCAACATCCTGGGTTGTCCCTGTGTGATGCTGATCAGCCCTGAGGCTGCACGCTTTGTGCTAGTGACTCAAGCTCACTTGTTCAAACCAACATACCCGAAAAGCAAAGAGCGTTTGATTGGTCCTTTTGCTTTGTTTTTCCATCAGGGAGACTACCACACTCGTCTGAGGAAGCTTGTTCAGAGGTCACTTTCCTTTGAAGCACTTCGCAACTTGGTGCCTCATATCGAAGCCTTAGTGTTATCTGGCATGAACTCTTGGGGTGATGGTCAAGTCATCAACATGTTTAAGGAAATGAAAAGGATTTCTTTTGAAGTTGGAATCCTCACTACTTTTGGCCATCTTGAGCCACGTTCGAGGGAGGAGCTAAAGAAGAATTACCGTATTGTGGATGCTGGTTACAATTCCTTCCCAACTTGCATTCCAGGAACACAGTACCAAAAAGCACTTTTGGCTAGAAAGAGACTCGGGAAGATTATAAGTGAGATTATCTGTGAGAGGAAGGAGAAGAAGTTGGTCGAAAGGGATCTTTTGAGTTGTCTGTTGAATTGGAAAGGTGAAGGAGGAGAAGTGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCGAAACTTCTGGAGTCAGTAAAGGCAGAGCAGAAGGCTATTCACAAGTCTAATGAAGGTAATAATCTACCACTGAGTTGGGATCAGACTAGAAACATGAGAATCACTCACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATTATTTCATTTCCTTTCAGAGAGGCAATAGCTGATGTGGAGTACAAGGGATTCTTAATACCAAAAGGGTGGAAAGCCATGCCTCTATTCAGAAATATTCACCACAATCCTGAGTTCTTTCCGGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTTGCACCAAAGCCCAATACTTTCATGCCATTTGGCAGTGGAGTACATGCCTGCCCTGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAATTTAGGTGGGAAGTGGTAGGATCCAAGTGTGGAATTCAGTATGGTCCATTTCCTTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 1419 0.4348 MDAIFAYIIVIFLTLFSFMFLPKLNRRKPQNQTTAKLPPGSMGWPYIGETLQLYSQDPNVYFSTKHKRFGEIFKTNILGCPCVMLISPEAARFVLVTQAHLFKPTYPKSKERLIGPFALFFHQGDYHTRLRKLVQRSLSFEALRNLVPHIEALVLSGMNSWGDGQVINMFKEMKRISFEVGILTTFGHLEPRSREELKKNYRIVDAGYNSFPTCIPGTQYQKALLARKRLGKIISEIICERKEKKLVERDLLSCLLNWKGEGGEVLSDDQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKAEQKAIHKSNEGNNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKCGIQYGPFPLPLNGLPARCWRESTS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00328 472 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 Pfam Cytochrome P450 38 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 SUPERFAMILY Cytochrome P450 34 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 FunFam Abscisic acid 8 27 468 - -
Viun8g00328 472 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 CDD CYP90-like 67 465 - -
Viun8g00328 472 Gene3D Cytochrome P450 26 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g00328 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Viun8g00328 472 PANTHER CYTOCHROME P450 26 35 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00328 Viun-Chr8 2092660 2097233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00328 7 470 Cytochrome P450 AT3G19270 65.517 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00328 8 2092660 2097233 Viun8g00328 8 2092660 2097233 ECH