Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00322 ATGGAAGTTTCAAGTCTTCAAAAGTTGTTGAAGACAGCACCATCTAAAGCATTGGTCATCAGATTCAATTTGGTGTGTCTTGCCATCTTTCTGGTTGTTTATGCAACCCTTCTTCTCCAACCATCTTCTTCAGTCTACTTTGAAAATGCAGCCTCTCTTGTTAGGTGCTCCTTGAGAGAATGCCATCACAAGGAAGAAAAAAGCATGAAGACGAAAGCAGTGTTGGAGGAACCAGAATTGAAAACTAGAATGCAAAAGCAGAATGCGACTAAGATAGAGGTGCCTAGCTTCGTTGCTGAAATGGGGAAGGGGTTGAAGATGGGAATGGTGAACATGCATGAAGATGATGTGAGCGAATGGAGCAACCTTGGAGAAACAACAGAGGTTTACTTCGAAAGGGTGTCAGTGTTTTTCAATTGGACAGATTTGTTTCCGGAATGGATAGACGAAGAGGAAGAGAGTGATGTTCCATCATGCCCCGAGATACCAATGCCAGAGTTTGCAGCATATGAAAACATGGACGTGATCATAGCCAAGTTGCCATGCAAGTACCCTGAAGAAGGGTGGGGAAGGGATGTTTTCAGGTTACAAGTTCATATGATTGTGGCGAATTTGGTGGTGAAGAAAGGGAAGAGGGATTGGAATTGGAAGACAAAAGTGGTGTTGTGGAGCAGGTGTAGGCCAATGATGGAGGTGTTTAGGTGCAACGATTTGGTTAAGCAGGAAAATGAGTGGTGGTATTATGAGGTTGATGTAAAGTGGTTGGAGGAGAAGGTGTCTTTGCCTATTGGGTCATGCAATTTGGCTCTGCCTCTTTGGGAACAAGGAATCGACAAGGTGTACGACACGTCAAAACTGGAACAGAACGTTCAAAGCGAAGCTCGAGCGAAACGCGAGGCCTACGCTACGGTTCTTCATTCGTCGGAAGGATACGTTTGCGGCGCAATAATGCTGGCGCAGACGCTTCTCCGATCGGGAACCAAACGCGACCTCGTGCTCCTCCTCGACAGCTCCATCTCCGCCGACAAGCGCCGCGCCCTCGAGCTCTCCGGCTGGAAGATCCGACTCATCACCCGGATCCGGAACCCGCGGGCCGAGAACGGCACCTACAACGAGTACAACTACAGCAAGTTCAGATTGTGGCAGTTGACGGAGTACGATAGAGTGATCTTCATCGACGCCGACATCATCGTCCTACGCAACCTCGACATCCTCTTCAATTTCCCTCAGATGTCCGCCACCGGTAATGACCAGTCCATCTTCAACTCCGGCATTATGGTTCTGGAACCTTCCAACTGTACCTTCGATGTTCTCATGTCGCGCCGCCACGATGTCGTCTCCTACAACGGGGGCGACCAGGGTTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCCCGGCGCGTGAACTTTCTGAAGAACTTCTGGGCGAACACGACGCTGGAGGCGAGTGTGAAGAACGCGATGTTCGGAGCGGACCCTCCGAAGCTCTATTCGATCCACTACCTGGGTCTGAAGCCCTGGCACTGTTACAGGGACTATGACTGCAACTGGGACGTGGAGGATCAGAGGGTGTACGCCAGCGACGTGGCGCATCGACGGTGGTGGAAGGTTCACGACGCCATGGACGAGCGGCTGCAGAGGCTCTGCCGGTTGACCCGAAAGAGAAGAACGGAGCTGAACTGGGAGAGGCGGAAGGCAGGGAAGCTTGGGTTGCCGGACATGCACTGGAAGATGAATGTGACAGATCCCAGAAGACAAGGCTCGCTTTTGATTGATTAG 1785 0.5092 MEVSSLQKLLKTAPSKALVIRFNLVCLAIFLVVYATLLLQPSSSVYFENAASLVRCSLRECHHKEEKSMKTKAVLEEPELKTRMQKQNATKIEVPSFVAEMGKGLKMGMVNMHEDDVSEWSNLGETTEVYFERVSVFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFAAYENMDVIIAKLPCKYPEEGWGRDVFRLQVHMIVANLVVKKGKRDWNWKTKVVLWSRCRPMMEVFRCNDLVKQENEWWYYEVDVKWLEEKVSLPIGSCNLALPLWEQGIDKVYDTSKLEQNVQSEARAKREAYATVLHSSEGYVCGAIMLAQTLLRSGTKRDLVLLLDSSISADKRRALELSGWKIRLITRIRNPRAENGTYNEYNYSKFRLWQLTEYDRVIFIDADIIVLRNLDILFNFPQMSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNAMFGADPPKLYSIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDERLQRLCRLTRKRRTELNWERRKAGKLGLPDMHWKMNVTDPRRQGSLLID 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00322 594 CDD GT8_Glycogenin 299 543 - -
Viun8g00322 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 189 588 - -
Viun8g00322 594 Pfam Glycosyl transferase family 8 335 510 IPR002495 GO:0016757
Viun8g00322 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 548 IPR029044 -
Viun8g00322 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 546 IPR029044 -
Viun8g00322 594 FunFam Hexosyltransferase 296 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00322 Viun-Chr8 2061937 2066063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00322 72 593 Glycosyltransferase AT4G33330 65.595 0.0 735
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00322 8 2061937 2066063 Viun8g00322 8 2061937 2066063 ECH
Viun8g00322 8 2061937 2066063 Viun9g03484 9 40918921 40924585 PCT