Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00318 ATGCAAGCAGTGGGGAGGCTTGGCAGCTACATCAGCCGCGGCGTGTACACTGTTTCAGGGCCGTTTCTTCCTTTTGGTGGGGCGGTGGACATTGTTGTGGTTCGGCAGAAAGATGGGAGCTTCAAATCCTCTCCTTGGTATGTTAGGTTTGGGAAATTGCACATGGTTTCGAAGGAGAAGGTGAAGGTTCATATCAGTGTCAACGGTGTAGAGCCTGATTTCTATTTGTATTTAAACCTCAAAGGGGAAGTTGTTTTCAACCATGGAGACACACAAGAAGAACAAGAAGGGGAATCGATAGTTGAGGGTGAAAGTGAAAGTACGAGTGATAGTGATGGTGTCATGCCACAGGGTGGTGGTAATAATAGGCATTTCAAGTCCATAAGTTGGAACTATGATTCTATGGGCAATTCAAAAGCAGAGGCTAAGGTTGTTGGTAGAACCAGGTCTCGCCGCTCTCGAATTCTTGGTCTTGTGTCACGGTCTTTGAGAGGAGGAGAGGGTGAAGATGGTGATGTGAATGGAGTGGATTCCGTGGAGCGTGCTGAGATTGCAGCCAACTTGTTGGAGCTGAAGTGGTCAACAAATCTCAGTTTTGATCATCAACTTCCACGAAAAGACAGGAAGAAAACTAAGGGTGAGGCCTTGAACAATGGTTTACCTTTACCACCACGTAACATGAAGGAGGAATCTTATTCTTGCAGTGAGCAAGATGCTACCAGATCAAAGCCTGTGTCTAATGAGATGCGCCTTGCAAGTGCAGGATGTGGAGAAGTTCGTTTCACTACTGAGGAGGTTTTGCAACCTGCAACTCTAGTTCTACCTGAGGTTAAAGAAAGTGAGGAAGTGACTAAGGATTTTGACATTGGGAGAACACAAATGGAGGCCTCTGTGTTACAGTCTCAGCAAAGAGAATGTTCCCATTCTGGTATGTGTGCTGCCGGCAATGTTGGAGACAAACCAATGTTTCGAAAATCTCATACTGTCAATATTGGTCGAAGAGATTGTTCGATTAAGAATGTTAGACAGAATACTCCAACGTCTGAACAACTTGAATCCTTGAATCTGAGGGAAGGGAGGAACACAATAACCTTCAGTTTCTCCACAGCTATGGGGAACCAGCAGGTTGATGCTCAAATATATTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTAGATGGAACAATTACAAGGTCAGATGTTCTAGGTCAATTCATGCCATTAGTAGGAATCGACTGGTCGCAAACAGGCGTTGCTCATTTATTCTCAGATATCAAGGAAAATGGCTACCAGCTACTTTTTCTCAGTGCTCGCGCAATATCTCAGGCCTATCACACCAGACAATTTCTTTGCAACCTTAAGCAGGATGGGAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCTTCTCTATATCGAGAAGTTATCCGGAGGGCTCCTCACGAGTTCAAAATTGCATGTTTAGAGGACATTAAGGCACTTTTTCCTCCTGATTGCAATCCATTCTATGCTGGTTTTGGAAATAGAGATACTGATGAAGTAAGCTACCTTAAGGTCGGAATCCCAAAAGGAAAAATTTTCATCATTAATCCAAGGGGTGAGATTGTTGTAAATAGTCGTTGTTTTGACACACATTCATACACCTCTCTTCATTCTCTTGTGAATGGAATGTTCCCCCCTACAAACTCATCTGAACAGGAAGATTTTAATTCATGGAATTACTGGAAATTACCCGAGACCTCTTCTGCTATAAATTAA 1779 0.4317 MQAVGRLGSYISRGVYTVSGPFLPFGGAVDIVVVRQKDGSFKSSPWYVRFGKLHMVSKEKVKVHISVNGVEPDFYLYLNLKGEVVFNHGDTQEEQEGESIVEGESESTSDSDGVMPQGGGNNRHFKSISWNYDSMGNSKAEAKVVGRTRSRRSRILGLVSRSLRGGEGEDGDVNGVDSVERAEIAANLLELKWSTNLSFDHQLPRKDRKKTKGEALNNGLPLPPRNMKEESYSCSEQDATRSKPVSNEMRLASAGCGEVRFTTEEVLQPATLVLPEVKESEEVTKDFDIGRTQMEASVLQSQQRECSHSGMCAAGNVGDKPMFRKSHTVNIGRRDCSIKNVRQNTPTSEQLESLNLREGRNTITFSFSTAMGNQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAYHTRQFLCNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKALFPPDCNPFYAGFGNRDTDEVSYLKVGIPKGKIFIINPRGEIVVNSRCFDTHSYTSLHSLVNGMFPPTNSSEQEDFNSWNYWKLPETSSAIN 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00318 592 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Viun8g00318 592 SUPERFAMILY HAD-like 381 531 IPR036412 -
Viun8g00318 592 MobiDBLite consensus disorder prediction 91 121 - -
Viun8g00318 592 SMART lns2 389 545 IPR031315 -
Viun8g00318 592 MobiDBLite consensus disorder prediction 106 121 - -
Viun8g00318 592 MobiDBLite consensus disorder prediction 202 229 - -
Viun8g00318 592 PANTHER LIPIN 335 587 IPR026058 -
Viun8g00318 592 Pfam LNS2 (Lipin/Ned1/Smp2) 345 566 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00318 Viun-Chr8 2004341 2009340 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00318 8 2004341 2009340 Viun8g00318 8 2004341 2009340 ECH
Viun8g00318 8 2004341 2009340 Viun9g03488 9 40935105 40943556 PCT